RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 PRMT7Q9NVM4 692 aaPredicted RBP18.85■□□□□ 0.61
HMG20B-212ENST00000487894 SRPRBQ9Y5M8 271 aaKnown RBP18.85■□□□□ 0.61
HMG20B-212ENST00000487894 TCHHQ07283 1943 aa18.84■□□□□ 0.61
HMG20B-212ENST00000487894 CNTNAP2Q9UHC6 1331 aa18.84■□□□□ 0.61
HMG20B-212ENST00000487894 EDN1P05305 212 aa18.84■□□□□ 0.61
HMG20B-212ENST00000487894 ZSCAN22P10073 491 aaPredicted RBP18.84■□□□□ 0.61
HMG20B-212ENST00000487894 NASPP49321 788 aaPredicted RBP18.84■□□□□ 0.61
HMG20B-212ENST00000487894 PKP1Q13835 747 aa18.84■□□□□ 0.61
HMG20B-212ENST00000487894 KARSQ15046 597 aaKnown RBP18.84■□□□□ 0.61
HMG20B-212ENST00000487894 FAM187BQ17R55 369 aa18.84■□□□□ 0.61
HMG20B-212ENST00000487894 NAALADL2Q58DX5 795 aa18.84■□□□□ 0.61
HMG20B-212ENST00000487894 SPOUT1Q5T280 376 aaKnown RBP18.84■□□□□ 0.61
HMG20B-212ENST00000487894 FOXD4L5Q5VV16 416 aaPredicted RBP18.84■□□□□ 0.61
HMG20B-212ENST00000487894 MRPL10Q7Z7H8 261 aaKnown RBP18.84■□□□□ 0.61
HMG20B-212ENST00000487894 KLHL23Q8NBE8 558 aa18.84■□□□□ 0.61
HMG20B-212ENST00000487894 COLGALT1Q8NBJ5 622 aa18.84■□□□□ 0.61
HMG20B-212ENST00000487894 FOXD4L4Q8WXT5 416 aaPredicted RBP18.84■□□□□ 0.61
HMG20B-212ENST00000487894 CALML4Q96GE6 196 aa18.84■□□□□ 0.61
HMG20B-212ENST00000487894 IFT74Q96LB3 600 aa18.84■□□□□ 0.61
HMG20B-212ENST00000487894 PRIMPOLQ96LW4 560 aa18.84■□□□□ 0.61
HMG20B-212ENST00000487894 KIFC3Q9BVG8 833 aa18.84■□□□□ 0.61
HMG20B-212ENST00000487894 EIF2AQ9BY44 585 aaKnown RBP18.84■□□□□ 0.61
HMG20B-212ENST00000487894 FZD8Q9H461 694 aa18.84■□□□□ 0.61
HMG20B-212ENST00000487894 DLL1O00548 723 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 F13A1P00488 732 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 SSBP05455 408 aaKnown RBP eCLIP18.83■□□□□ 0.6
HMG20B-212ENST00000487894 ITGB1P05556 798 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 PLA2G4BP0C869 781 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 PDIA4P13667 645 aaKnown RBP18.83■□□□□ 0.6
HMG20B-212ENST00000487894 PLCG1P19174 1290 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 NCLP19338 710 aaKnown RBP18.83■□□□□ 0.6
HMG20B-212ENST00000487894 GUCY2CP25092 1073 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 SLC39A14Q15043 492 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 PTPROQ16827 1216 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 SPECC1Q5M775 1068 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 AGMOQ6ZNB7 445 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 USP49Q70CQ1 688 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 SMG8Q8ND04 991 aaKnown RBP18.83■□□□□ 0.6
HMG20B-212ENST00000487894 DEPTORQ8TB45 409 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 PGBD4Q96DM1 585 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 EPSTI1Q96J88 318 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 DRC1Q96MC2 740 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 CLIC6Q96NY7 704 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 TIPINQ9BVW5 301 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 MRPL9Q9BYD2 267 aaKnown RBP18.83■□□□□ 0.6
HMG20B-212ENST00000487894 CCSER1Q9C0I3 900 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 LMAN2LQ9H0V9 348 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 ALG13Q9NP73 1137 aaKnown RBP18.83■□□□□ 0.6
HMG20B-212ENST00000487894 BLOC1S4Q9NUP1 217 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 PLAGL2Q9UPG8 496 aa18.83■□□□□ 0.6
HMG20B-212ENST00000487894 TTLL13PA6NNM8 815 aa18.82■□□□□ 0.6
HMG20B-212ENST00000487894 PRKCBP05771 671 aa18.82■□□□□ 0.6
HMG20B-212ENST00000487894 LAG3P18627 525 aa18.82■□□□□ 0.6
HMG20B-212ENST00000487894 NCBP1Q09161 790 aaKnown RBP18.82■□□□□ 0.6
HMG20B-212ENST00000487894 CDR2LQ86X02 465 aaPredicted RBP18.82■□□□□ 0.6
HMG20B-212ENST00000487894 RSPH1Q8WYR4 309 aa18.82■□□□□ 0.6
HMG20B-212ENST00000487894 AAASQ9NRG9 546 aa18.82■□□□□ 0.6
HMG20B-212ENST00000487894 KCND2Q9NZV8 630 aa18.82■□□□□ 0.6
HMG20B-212ENST00000487894 IPPQ9Y573 584 aa18.82■□□□□ 0.6
HMG20B-212ENST00000487894 PCDHB12Q9Y5F1 795 aa18.82■□□□□ 0.6
HMG20B-212ENST00000487894 VCANP13611 3396 aa18.82■□□□□ 0.6
HMG20B-212ENST00000487894 PDCD11Q14690 1871 aaKnown RBP18.82■□□□□ 0.6
HMG20B-212ENST00000487894 CITO14578 2027 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 A0A1B0GUA9 196 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 OFD1O75665 1012 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 DNAJB1P25685 340 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 NPTX2P47972 431 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 PEX3P56589 373 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 RAD51AP2Q09MP3 1159 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 CAMK1Q14012 370 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 MAPK6Q16659 721 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 TIGD5Q53EQ6 642 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 ARSHQ5FYA8 562 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 SLC27A1Q6PCB7 646 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 GLB1LQ6UWU2 654 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 LINC00301Q8NCQ3 95 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 CNNM3Q8NE01 707 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 RASSF8Q8NHQ8 419 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 SPPL3Q8TCT6 385 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 RAD54LQ92698 747 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 SYMPKQ92797 1274 aaKnown RBP18.81■□□□□ 0.6
HMG20B-212ENST00000487894 RSAD1Q9HA92 442 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 THEGQ9P2T0 379 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 INPP5FQ9Y2H2 1132 aa18.81■□□□□ 0.6
HMG20B-212ENST00000487894 PHLPP2Q6ZVD8 1323 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 NPHP3-ACAD11A0A0J9YXS1 232 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 ACKR2O00590 384 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 NPTXRO95502 500 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 PBX3P40426 434 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 EFNA5P52803 228 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 DMP1Q13316 513 aaPredicted RBP18.8■□□□□ 0.6
HMG20B-212ENST00000487894 PRPF4BQ13523 1007 aaKnown RBP18.8■□□□□ 0.6
HMG20B-212ENST00000487894 MCM6Q14566 821 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 STK38Q15208 465 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 CSPP1Q1MSJ5 1256 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 NOMO2Q5JPE7 1267 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 KCNT2Q6UVM3 1135 aa18.8■□□□□ 0.6
HMG20B-212ENST00000487894 KRI1Q8N9T8 703 aaKnown RBP18.8■□□□□ 0.6
HMG20B-212ENST00000487894 ZNF396Q96N95 335 aaPredicted RBP18.8■□□□□ 0.6
HMG20B-212ENST00000487894 RNF39Q9H2S5 420 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms