RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 ADAM7Q9H2U9 754 aa7.14□□□□□ -1.27
USP48-209ENST00000487880 GREM2Q9H772 168 aa7.14□□□□□ -1.27
USP48-209ENST00000487880 TUBD1Q9UJT1 453 aa7.14□□□□□ -1.27
USP48-209ENST00000487880 OAZ3Q9UMX2 235 aa7.14□□□□□ -1.27
USP48-209ENST00000487880 SLC26A4O43511 780 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 PRICKLE3O43900 615 aaPredicted RBP7.13□□□□□ -1.27
USP48-209ENST00000487880 ALDH1A2O94788 518 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 ABLIM3O94929 683 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 ZRANB2O95218 330 aaKnown RBP eCLIP7.13□□□□□ -1.27
USP48-209ENST00000487880 VSIG10L2P0DP72 767 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 CTSSP25774 331 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 MCAMP43121 646 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 BPIFB4P59827 614 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 CCT2P78371 535 aaKnown RBP7.13□□□□□ -1.27
USP48-209ENST00000487880 DUSP8Q13202 625 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 PIN1Q13526 163 aaPredicted RBP7.13□□□□□ -1.27
USP48-209ENST00000487880 SAFB2Q14151 953 aaKnown RBP eCLIP7.13□□□□□ -1.27
USP48-209ENST00000487880 ACAP2Q15057 778 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 UBE3CQ15386 1083 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 TBC1D10BQ4KMP7 808 aaPredicted RBP7.13□□□□□ -1.27
USP48-209ENST00000487880 C19orf54Q5BKX5 351 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 MUM1L1Q5H9M0 696 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 SLFN13Q68D06 897 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 TTLL10Q6ZVT0 673 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 PNMA8AQ86V59 439 aaPredicted RBP7.13□□□□□ -1.27
USP48-209ENST00000487880 RABGGTAQ92696 567 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 GPHA2Q96T91 129 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 RTEL1Q9NZ71 1219 aa7.13□□□□□ -1.27
USP48-209ENST00000487880 A0A0G2JLL6 359 aaPredicted RBP7.12□□□□□ -1.27
USP48-209ENST00000487880 AKAP10O43572 662 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 NDUFS2O75306 463 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 PLATP00750 562 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 JUNP05412 331 aaKnown RBP7.12□□□□□ -1.27
USP48-209ENST00000487880 HOXA5P20719 270 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 WNT3AP56704 352 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 PPP3CAQ08209 521 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 ABHD15Q6UXT9 468 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 RAVER1Q8IY67 606 aaKnown RBP7.12□□□□□ -1.27
USP48-209ENST00000487880 CMTR2Q8IYT2 770 aaKnown RBP7.12□□□□□ -1.27
USP48-209ENST00000487880 CPA6Q8N4T0 437 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 SNX33Q8WV41 574 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 HOXB13Q92826 284 aaPredicted RBP7.12□□□□□ -1.27
USP48-209ENST00000487880 LMF1Q96S06 567 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 PTPN18Q99952 460 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 DPYSL5Q9BPU6 564 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 DMRT3Q9NQL9 472 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 AASDHPPTQ9NRN7 309 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 PPP4R1LQ9P1A2 415 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 RAPGEFL1Q9UHV5 662 aa7.12□□□□□ -1.27
USP48-209ENST00000487880 PUF60Q9UHX1 559 aaKnown RBP7.12□□□□□ -1.27
USP48-209ENST00000487880 LUC7L2Q9Y383 392 aaKnown RBP7.12□□□□□ -1.27
USP48-209ENST00000487880 RPTORQ8N122 1335 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 E2F8A0AVK6 867 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 SNUPNO95149 360 aaKnown RBP7.11□□□□□ -1.27
USP48-209ENST00000487880 CR2P20023 1033 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 CCND1P24385 295 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 WASP42768 502 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 RAB27AP51159 221 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 ACAP1Q15027 740 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 MST1LQ2TV78 715 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 UBXN11Q5T124 520 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 EFCAB2Q5VUJ9 269 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 ADGRE4PQ86SQ3 457 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 GPR135Q8IZ08 494 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 ANKRD53Q8N9V6 530 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 RIN2Q8WYP3 895 aaPredicted RBP7.11□□□□□ -1.27
USP48-209ENST00000487880 CAMKK2Q96RR4 588 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 SSBP3Q9BWW4 388 aaPredicted RBP7.11□□□□□ -1.27
USP48-209ENST00000487880 RTFDC1Q9BY42 306 aaPredicted RBP7.11□□□□□ -1.27
USP48-209ENST00000487880 AGO3Q9H9G7 860 aaKnown RBP7.11□□□□□ -1.27
USP48-209ENST00000487880 METTL14Q9HCE5 456 aaKnown RBP7.11□□□□□ -1.27
USP48-209ENST00000487880 ING3Q9NXR8 418 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 KLHL42Q9P2K6 505 aa7.11□□□□□ -1.27
USP48-209ENST00000487880 ADKP55263 362 aaKnown RBP7.1□□□□□ -1.27
USP48-209ENST00000487880 MGAT2Q10469 447 aa7.1□□□□□ -1.27
USP48-209ENST00000487880 GJC2Q5T442 439 aaPredicted RBP7.1□□□□□ -1.27
USP48-209ENST00000487880 LILRA3Q8N6C8 439 aaPredicted RBP7.1□□□□□ -1.27
USP48-209ENST00000487880 GPR156Q8NFN8 814 aa7.1□□□□□ -1.27
USP48-209ENST00000487880 JDP2Q8WYK2 163 aa7.1□□□□□ -1.27
USP48-209ENST00000487880 LRRC37BQ96QE4 947 aa7.1□□□□□ -1.27
USP48-209ENST00000487880 KRTAP4-9Q9BYQ8 210 aa7.1□□□□□ -1.27
USP48-209ENST00000487880 RHOBTB2Q9BYZ6 727 aa7.1□□□□□ -1.27
USP48-209ENST00000487880 ENKD1Q9H0I2 346 aa7.1□□□□□ -1.27
USP48-209ENST00000487880 CDH19Q9H159 772 aa7.1□□□□□ -1.27
USP48-209ENST00000487880 RBM12Q9NTZ6 932 aaKnown RBP7.1□□□□□ -1.27
USP48-209ENST00000487880 EID1Q9Y6B2 187 aa7.1□□□□□ -1.27
USP48-209ENST00000487880 PRAMEF4O60810 478 aa7.09□□□□□ -1.27
USP48-209ENST00000487880 RIN1Q13671 783 aa7.09□□□□□ -1.27
USP48-209ENST00000487880 NFE2Q16621 373 aaPredicted RBP7.09□□□□□ -1.27
USP48-209ENST00000487880 THEMISQ8N1K5 641 aaPredicted RBP7.09□□□□□ -1.27
USP48-209ENST00000487880 SHCBP1Q8NEM2 672 aa7.09□□□□□ -1.27
USP48-209ENST00000487880 RPL10LQ96L21 214 aaKnown RBP7.09□□□□□ -1.27
USP48-209ENST00000487880 RBM15Q96T37 977 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP48-209ENST00000487880 IL23AQ9NPF7 189 aa7.09□□□□□ -1.27
USP48-209ENST00000487880 TLR9Q9NR96 1032 aa7.09□□□□□ -1.27
USP48-209ENST00000487880 NRP1O14786 923 aa7.08□□□□□ -1.28
USP48-209ENST00000487880 CDC14BO60729 498 aa7.08□□□□□ -1.28
USP48-209ENST00000487880 PHF2O75151 1096 aa7.08□□□□□ -1.28
USP48-209ENST00000487880 HSP90B1P14625 803 aaKnown RBP7.08□□□□□ -1.28
USP48-209ENST00000487880 FBLN7Q53RD9 439 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms