RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SF3A3Q12874 501 aaKnown RBP eCLIP12.68□□□□□ -0.383e-8■■■■■ 29.7
TRA2B-214ENST00000487615 SCYL2Q6P3W7 929 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 GJB7Q6PEY0 223 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 ARMC9Q7Z3E5 817 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 SAMD7Q7Z3H4 446 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 DPP9Q86TI2 863 aa12.68□□□□□ -0.38
TRA2B-214ENST00000487615 INTS9Q9NV88 658 aaKnown RBP12.68□□□□□ -0.38
TRA2B-214ENST00000487615 MED7O43513 233 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 SNRPFP62306 86 aaKnown RBP12.67□□□□□ -0.38
TRA2B-214ENST00000487615 RBM46Q8TBY0 533 aaKnown RBP12.67□□□□□ -0.38
TRA2B-214ENST00000487615 MOV10L1Q9BXT6 1211 aaKnown RBP12.67□□□□□ -0.38
TRA2B-214ENST00000487615 WNT8AQ9H1J5 351 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 RBAKQ9NYW8 714 aaPredicted RBP12.67□□□□□ -0.38
TRA2B-214ENST00000487615 ANAPC5Q9UJX4 755 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 RRP15Q9Y3B9 282 aaKnown RBP12.67□□□□□ -0.38
TRA2B-214ENST00000487615 COL1A1P02452 1464 aaPredicted RBP12.67□□□□□ -0.38
TRA2B-214ENST00000487615 MEIS2O14770 477 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 TMEM253P0C7T8 217 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 TBXAS1P24557 533 aaPredicted RBP12.67□□□□□ -0.38
TRA2B-214ENST00000487615 CHRNA3P32297 505 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 PLA2G4AP47712 749 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 CXCL9Q07325 125 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 KRT81Q14533 505 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 ANGEL2Q5VTE6 544 aaKnown RBP12.67□□□□□ -0.38
TRA2B-214ENST00000487615 TMEM139Q8IV31 216 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRA2B-214ENST00000487615 C11orf70Q9BRQ4 267 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 INTUQ9ULD6 942 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 SCARA5Q6ZMJ2 495 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 ZNF720Q7Z2F6 126 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 CCDC13Q8IYE1 715 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 SREK1Q8WXA9 508 aaKnown RBP12.67□□□□□ -0.38
TRA2B-214ENST00000487615 RPF1Q9H9Y2 349 aaKnown RBP12.67□□□□□ -0.38
TRA2B-214ENST00000487615 MAP3K20Q9NYL2 800 aaKnown RBP12.67□□□□□ -0.38
TRA2B-214ENST00000487615 SLIT2O94813 1529 aa12.67□□□□□ -0.38
TRA2B-214ENST00000487615 ZRANB2O95218 330 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRA2B-214ENST00000487615 PHBP35232 272 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 NBPF9Q3BBW0 867 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 TMEM35BQ8NCS4 154 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 RDM1Q8NG50 284 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 DNAJC19Q96DA6 116 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 PCDHAC2Q9Y5I4 1007 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 MYH2Q9UKX2 1941 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 LRRD1A4D1F6 860 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 FAM187AA6NFU0 413 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 NFIBO00712 420 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 KIAA0391O15091 583 aaKnown RBP12.66□□□□□ -0.38
TRA2B-214ENST00000487615 NPM3O75607 178 aaKnown RBP12.66□□□□□ -0.38
TRA2B-214ENST00000487615 ZSCAN20P17040 1043 aaPredicted RBP12.66□□□□□ -0.38
TRA2B-214ENST00000487615 PDCLQ13371 301 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 ZNF394Q53GI3 561 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 CAPN12Q6ZSI9 719 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 OTOP1Q7RTM1 612 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 PASD1Q8IV76 773 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 PALM2Q8IXS6 379 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 GLIS3Q8NEA6 775 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 CNOT10Q9H9A5 744 aaKnown RBP12.66□□□□□ -0.38
TRA2B-214ENST00000487615 L1RE1Q9UN81 338 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 SIK3Q9Y2K2 1263 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 FAM169AQ9Y6X4 670 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 STK10O94804 968 aaKnown RBP12.66□□□□□ -0.38
TRA2B-214ENST00000487615 SLC12A3P55017 1021 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 GRM1Q13255 1194 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 SLC30A10Q6XR72 485 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 IRF2BP1Q8IU81 584 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 HVCN1Q96D96 273 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 GOLPH3Q9H4A6 298 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 HPCAL4Q9UM19 191 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 GTPBP10A4D1E9 387 aaKnown RBP12.66□□□□□ -0.38
TRA2B-214ENST00000487615 SGK1O00141 431 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 RASGRF2O14827 1237 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 DAPK3O43293 454 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 CIITAP33076 1130 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 TRIP13Q15645 432 aaPredicted RBP12.66□□□□□ -0.38
TRA2B-214ENST00000487615 PRAMEF18Q5VWM3 479 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 FYB2Q5VWT5 728 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 LRRC55Q6ZSA7 311 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 ERICH1Q86X53 443 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 USP38Q8NB14 1042 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 FBF1Q8TES7 1133 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 TRIM7Q9C029 511 aa12.66□□□□□ -0.38
TRA2B-214ENST00000487615 CYP3A7-CYP3A51PA0A087WV96 503 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 CYP3A4P08684 503 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 CYP3A7P24462 503 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 GUCY2CP25092 1073 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 SLCO1A2P46721 670 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 PRKCEQ02156 737 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 CCDC14Q49A88 953 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 ZNF667Q5HYK9 610 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 MIIPQ5JXC2 388 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 CEP57Q86XR8 500 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 MAP7D3Q8IWC1 876 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 GPRASP2Q96D09 838 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 ANKZF1Q9H8Y5 726 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 EHD2Q9NZN4 543 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 HACL1Q9UJ83 578 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 M0QZ92 97 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 SLITRK3O94933 977 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 CNGA1P29973 690 aa12.65□□□□□ -0.38
TRA2B-214ENST00000487615 GNA15P30679 374 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms