RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	TPRN	Q4KMQ1	711 aa		13.85	□□□□□ -0.19
SREBF1-215	ENST00000487401	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.85	□□□□□ -0.19
SREBF1-215	ENST00000487401	DDX53	Q86TM3	631 aa	Known RBP	13.85	□□□□□ -0.19
SREBF1-215	ENST00000487401	CNNM3	Q8NE01	707 aa		13.85	□□□□□ -0.19
SREBF1-215	ENST00000487401	PIGO	Q8TEQ8	1089 aa		13.85	□□□□□ -0.19
SREBF1-215	ENST00000487401	CCDC51	Q96ER9	411 aa		13.85	□□□□□ -0.19
SREBF1-215	ENST00000487401	IGSF21	Q96ID5	467 aa		13.85	□□□□□ -0.19
SREBF1-215	ENST00000487401	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.85	□□□□□ -0.19
SREBF1-215	ENST00000487401	APOL5	Q9BWW9	433 aa		13.85	□□□□□ -0.19
SREBF1-215	ENST00000487401	RSAD1	Q9HA92	442 aa		13.85	□□□□□ -0.19
SREBF1-215	ENST00000487401	CNTNAP2	Q9UHC6	1331 aa		13.85	□□□□□ -0.19
SREBF1-215	ENST00000487401		A0A087WWV3	80 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	WNT7A	O00755	349 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	CLASP2	O75122	1294 aa	Known RBP	13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	ITGA4	P13612	1032 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	NCL	P19338	710 aa	Known RBP	13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	ARL2	P36404	184 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	SLC11A1	P49279	550 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	POU5F1B	Q06416	359 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	ST3GAL1	Q11201	340 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	KCNC3	Q14003	757 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	GIT2	Q14161	759 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	UBXN11	Q5T124	520 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	CES5A	Q6NT32	575 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	NOTUM	Q6P988	496 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	SYCE2	Q6PIF2	218 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	AGMO	Q6ZNB7	445 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	ZNF280B	Q86YH2	543 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	FAM184A	Q8NB25	1140 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	ERMN	Q8TAM6	284 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	ASAP3	Q8TDY4	903 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	SUSD6	Q92537	303 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	S1PR5	Q9H228	398 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	TMEM60	Q9H2L4	133 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	XPNPEP1	Q9NQW7	623 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	STK39	Q9UEW8	545 aa		13.84	□□□□□ -0.19
SREBF1-215	ENST00000487401	RALGAPA2	Q2PPJ7	1873 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	POTEM	A6NI47	508 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	TSPAN1	O60635	241 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	POMC	P01189	267 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	CTSA	P10619	480 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	RBM25	P49756	843 aa	Known RBP	13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	RARRES1	P49788	294 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	HMGN5	P82970	282 aa	Known RBP	13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	CBX2	Q14781	532 aa	Predicted RBP	13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	ZNF174	Q15697	407 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	MAEA	Q7L5Y9	396 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	TMEM173	Q86WV6	379 aa	Predicted RBP	13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	HACE1	Q8IYU2	909 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	AUTS2	Q8WXX7	1259 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	EDA	Q92838	391 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	CPB2	Q96IY4	423 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	NACC1	Q96RE7	527 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	TMEM175	Q9BSA9	504 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	TRIM6	Q9C030	488 aa	Predicted RBP	13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	ZBP1	Q9H171	429 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	FOXP1	Q9H334	677 aa	Predicted RBP	13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	TUFT1	Q9NNX1	390 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	DNAJB4	Q9UDY4	337 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	FAN1	Q9Y2M0	1017 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	HCFC2	Q9Y5Z7	792 aa		13.83	□□□□□ -0.2
SREBF1-215	ENST00000487401	USO1	O60763	962 aa	Known RBP	13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	NR1I2	O75469	434 aa		13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	DDHD2	O94830	711 aa		13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	GLRA2	P23416	452 aa		13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	MBTD1	Q05BQ5	628 aa		13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	ORC2	Q13416	577 aa	Predicted RBP	13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	CAPS	Q13938	189 aa		13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	CATSPER3	Q86XQ3	398 aa		13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	SMG8	Q8ND04	991 aa	Known RBP	13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	FBXO18	Q8NFZ0	1043 aa		13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	MFSD14A	Q96MC6	490 aa		13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	EMILIN2	Q9BXX0	1053 aa		13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	EIF2A	Q9BY44	585 aa	Known RBP	13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	CSRNP2	Q9H175	543 aa		13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	ADAM7	Q9H2U9	754 aa		13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	DZANK1	Q9NVP4	752 aa		13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	IPP	Q9Y573	584 aa		13.82	□□□□□ -0.2
SREBF1-215	ENST00000487401	BRWD1	Q9NSI6	2320 aa		13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	LRRIQ4	A6NIV6	560 aa		13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	NRP1	O14786	923 aa		13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	OR52Z1	P0C646	297 aa		13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	SPATA31C1	P0DKV0	1188 aa		13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	AFF1	P51825	1210 aa	Known RBP	13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	ITIH3	Q06033	890 aa		13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	PPFIBP1	Q86W92	1011 aa		13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	MCPH1	Q8NEM0	835 aa		13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	RIPOR3	Q96MK2	946 aa		13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	NECTIN4	Q96NY8	510 aa		13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	APOL6	Q9BWW8	343 aa		13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	NFKBIZ	Q9BYH8	718 aa		13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	RNF39	Q9H2S5	420 aa		13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	TSHZ2	Q9NRE2	1034 aa		13.81	□□□□□ -0.2
SREBF1-215	ENST00000487401	DBR1	Q9UK59	544 aa	Known RBP	13.81	□□□□□ -0.2

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