RNA–Protein interactions for RNA: ENST00000487223.5

CAPN2-209, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 2,991 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-209ENST00000487223 HAND2P61296 217 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 RABEP1Q15276 862 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 ADCK5Q3MIX3 580 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 TTC39BQ5VTQ0 682 aaPredicted RBP6.9□□□□□ -1.3
CAPN2-209ENST00000487223 ANO1Q5XXA6 986 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 ASTLQ6HA08 431 aaPredicted RBP6.9□□□□□ -1.3
CAPN2-209ENST00000487223 ZCCHC8Q6NZY4 707 aaKnown RBP6.9□□□□□ -1.3
CAPN2-209ENST00000487223 MIS18BP1Q6P0N0 1132 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 RNF168Q8IYW5 571 aaPredicted RBP6.9□□□□□ -1.3
CAPN2-209ENST00000487223 LSM14AQ8ND56 463 aaKnown RBP6.9□□□□□ -1.3
CAPN2-209ENST00000487223 FBXL18Q96ME1 805 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 YIPF2Q9BWQ6 316 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 SFXN1Q9H9B4 322 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 CD248Q9HCU0 757 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 TLR9Q9NR96 1032 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 UTP6Q9NYH9 597 aaKnown RBP6.9□□□□□ -1.3
CAPN2-209ENST00000487223 PCDHA1Q9Y5I3 950 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 CCDC66A2RUB6 948 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 NOP56O00567 594 aaKnown RBP6.9□□□□□ -1.3
CAPN2-209ENST00000487223 CCP110O43303 1012 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 HOXA6P31267 233 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 CTNNB1P35222 781 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 KCNQ1P51787 676 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 IGBP1P78318 339 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 PPFIA1Q13136 1202 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 ZNF771Q7L3S4 317 aaPredicted RBP6.9□□□□□ -1.3
CAPN2-209ENST00000487223 DBF4BQ8NFT6 615 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 GDPD5Q8WTR4 605 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 LMBR1Q8WVP7 490 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 CLEC1BQ9P126 229 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 KCNH3Q9ULD8 1083 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 N6AMT1Q9Y5N5 214 aa6.9□□□□□ -1.3
CAPN2-209ENST00000487223 CCDC196A0A1B0GTZ2 297 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 GSTTP1A0A1W2PQM5 241 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 TBX3O15119 743 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 KIF5CO60282 957 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 PPFIA3O75145 1194 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 AKAP3O75969 853 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 CHRNA1P02708 482 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 CCDC175P0C221 793 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 THPOP40225 353 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 USP11P51784 963 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 EXOSC10Q01780 885 aaKnown RBP6.9□□□□□ -1.31
CAPN2-209ENST00000487223 PAK2Q13177 524 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 MTMR3Q13615 1198 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 MARCH8Q5T0T0 291 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 TTBK2Q6IQ55 1244 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 ZC3H14Q6PJT7 736 aaKnown RBP6.9□□□□□ -1.31
CAPN2-209ENST00000487223 ANKRD13BQ86YJ7 626 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 PGBD4Q96DM1 585 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 TM6SF1Q9BZW5 370 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 LMBRD1Q9NUN5 540 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 ZDHHC7Q9NXF8 308 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 SEC63Q9UGP8 760 aaKnown RBP6.9□□□□□ -1.31
CAPN2-209ENST00000487223 RSPH14Q9UHP6 348 aa6.9□□□□□ -1.31
CAPN2-209ENST00000487223 WDR81Q562E7 1941 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 IGKV6-21A0A0C4DH24 114 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 MEIS1O00470 390 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 LIMK1P53667 647 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 ANTXR2P58335 489 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 MRPS9P82933 396 aaKnown RBP6.89□□□□□ -1.31
CAPN2-209ENST00000487223 PRKCQQ04759 706 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 TCTN1Q2MV58 587 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 FAM47CQ5HY64 1035 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 MTHFD1LQ6UB35 978 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 ZNF598Q86UK7 904 aaKnown RBP6.89□□□□□ -1.31
CAPN2-209ENST00000487223 GLG1Q92896 1179 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 TMX1Q9H3N1 280 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 CWH43Q9H720 699 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 ZSWIM6Q9HCJ5 1215 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 TUBE1Q9UJT0 475 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 MEIS2O14770 477 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 HNRNPA1P09651 372 aaKnown RBP eCLIP6.89□□□□□ -1.31
CAPN2-209ENST00000487223 IL4RP24394 825 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 KRT17Q04695 432 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 LY6KQ17RY6 165 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 Q4G0T1 1027 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 C10orf62Q5T681 223 aaPredicted RBP6.89□□□□□ -1.31
CAPN2-209ENST00000487223 PDXDC2PQ6P474 469 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 ABHD15Q6UXT9 468 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 CYB5R4Q7L1T6 521 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 OTOP3Q7RTS5 596 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 NT5DC4Q86YG4 428 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 FMNL3Q8IVF7 1028 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 SLC39A11Q8N1S5 342 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 TRIML1Q8N9V2 468 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 CTCFLQ8NI51 663 aaPredicted RBP6.89□□□□□ -1.31
CAPN2-209ENST00000487223 IGDCC4Q8TDY8 1250 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 CEP63Q96MT8 703 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 ZNF558Q96NG5 402 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 DDX23Q9BUQ8 820 aaKnown RBP6.89□□□□□ -1.31
CAPN2-209ENST00000487223 AZI2Q9H6S1 392 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 IFT122Q9HBG6 1241 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 AGO4Q9HCK5 861 aaKnown RBP6.89□□□□□ -1.31
CAPN2-209ENST00000487223 JPH1Q9HDC5 661 aaPredicted RBP6.89□□□□□ -1.31
CAPN2-209ENST00000487223 TOMM22Q9NS69 142 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 SLC9A2Q9UBY0 812 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 USP25Q9UHP3 1055 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 DUSP12Q9UNI6 340 aa6.89□□□□□ -1.31
CAPN2-209ENST00000487223 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms