RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 NAMPTP43490 491 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 PTENP60484 403 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 ERVK-21P61565 698 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 MBTD1Q05BQ5 628 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 DMP1Q13316 513 aaPredicted RBP11.29□□□□□ -0.6
NEK4-204ENST00000487068 PKP1Q13835 747 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 PTPAQ15257 358 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 EPC2Q52LR7 807 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 NOTUMQ6P988 496 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 TMEM192Q8IY95 271 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 LRRC43Q8N309 656 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 KRI1Q8N9T8 703 aaKnown RBP11.29□□□□□ -0.6
NEK4-204ENST00000487068 HELQQ8TDG4 1101 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 CLIC6Q96NY7 704 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 PNMA5Q96PV4 448 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 KIFC3Q9BVG8 833 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 RUSC1Q9BVN2 902 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 APOL6Q9BWW8 343 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 ZHX3Q9H4I2 956 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 ELAC1Q9H777 363 aaKnown RBP11.29□□□□□ -0.6
NEK4-204ENST00000487068 FAM105AQ9NUU6 356 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 PRMT7Q9NVM4 692 aaPredicted RBP11.29□□□□□ -0.6
NEK4-204ENST00000487068 TFIP11Q9UBB9 837 aaKnown RBP11.29□□□□□ -0.6
NEK4-204ENST00000487068 MRPL42Q9Y6G3 142 aaKnown RBP11.29□□□□□ -0.6
NEK4-204ENST00000487068 NCOR1O75376 2440 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 MYO7AQ13402 2215 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.28□□□□□ -0.6
NEK4-204ENST00000487068 A0A0U1RQF3 1178 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 TULP1O00294 542 aaPredicted RBP11.28□□□□□ -0.6
NEK4-204ENST00000487068 SPTLC2O15270 562 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 SLC26A4O43511 780 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 TSPAN1O60635 241 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 PRKCBP05771 671 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 AXLP30530 894 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 PEX3P56589 373 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 CACNB1Q02641 598 aaPredicted RBP11.28□□□□□ -0.6
NEK4-204ENST00000487068 TFF2Q03403 129 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 RNASELQ05823 741 aaKnown RBP11.28□□□□□ -0.6
NEK4-204ENST00000487068 GPM6BQ13491 265 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 MAPK6Q16659 721 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 TMEM119Q4V9L6 283 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 HYIQ5T013 277 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 RINT1Q6NUQ1 792 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 GPBP1Q86WP2 473 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 BSNDQ8WZ55 320 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 LPPQ93052 612 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 ZNF689Q96CS4 500 aaPredicted RBP11.28□□□□□ -0.6
NEK4-204ENST00000487068 PGBD4Q96DM1 585 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 C11orf84Q9BUA3 381 aaPredicted RBP11.28□□□□□ -0.6
NEK4-204ENST00000487068 RC3H2Q9HBD1 1191 aaKnown RBP11.28□□□□□ -0.6
NEK4-204ENST00000487068 AAASQ9NRG9 546 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 FBXO2Q9UK22 296 aaPredicted RBP11.28□□□□□ -0.6
NEK4-204ENST00000487068 HCN4Q9Y3Q4 1203 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 SRPRBQ9Y5M8 271 aaKnown RBP11.28□□□□□ -0.6
NEK4-204ENST00000487068 PHLPP2Q6ZVD8 1323 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 CHD9Q3L8U1 2897 aa11.28□□□□□ -0.6
NEK4-204ENST00000487068 B4GALT5O43286 388 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 TBCAO75347 108 aaKnown RBP11.27□□□□□ -0.61
NEK4-204ENST00000487068 NPTXRO95502 500 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 EOMESO95936 686 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 ARF4P18085 180 aaPredicted RBP11.27□□□□□ -0.61
NEK4-204ENST00000487068 STAT6P42226 847 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 NASPP49321 788 aaPredicted RBP11.27□□□□□ -0.61
NEK4-204ENST00000487068 KCNQ1P51787 676 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 POU5F1BQ06416 359 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 PRPF4BQ13523 1007 aaKnown RBP11.27□□□□□ -0.61
NEK4-204ENST00000487068 MCM6Q14566 821 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 SLC39A14Q15043 492 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 PCBP1Q15365 356 aaKnown RBP eCLIP11.27□□□□□ -0.61
NEK4-204ENST00000487068 PTPROQ16827 1216 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 CDCA2Q69YH5 1023 aaPredicted RBP11.27□□□□□ -0.61
NEK4-204ENST00000487068 GLB1LQ6UWU2 654 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 CDR2LQ86X02 465 aaPredicted RBP11.27□□□□□ -0.61
NEK4-204ENST00000487068 THNSL1Q8IYQ7 743 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 HACE1Q8IYU2 909 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 KCTD17Q8N5Z5 321 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 URGCPQ8TCY9 931 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 LARP4BQ92615 738 aaKnown RBP11.27□□□□□ -0.61
NEK4-204ENST00000487068 EPSTI1Q96J88 318 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 ADPGKQ9BRR6 497 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 TIPINQ9BVW5 301 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 MRPL9Q9BYD2 267 aaKnown RBP11.27□□□□□ -0.61
NEK4-204ENST00000487068 NFKBIZQ9BYH8 718 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 TMEM117Q9H0C3 514 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 GBP3Q9H0R5 595 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 KMT5AQ9NQR1 393 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 HCSTQ9UBK5 93 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 PCDHB2Q9Y5E7 798 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 PCDHB12Q9Y5F1 795 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 CNTNAP2Q9UHC6 1331 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 ANK1P16157 1881 aa11.27□□□□□ -0.61
NEK4-204ENST00000487068 FAM13AO94988 1023 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 YEATS4O95619 227 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 ITGA4P13612 1032 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 ATF7P17544 494 aaPredicted RBP11.26□□□□□ -0.61
NEK4-204ENST00000487068 LAG3P18627 525 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 GUCY2CP25092 1073 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 ME1P48163 572 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 EFNA5P52803 228 aa11.26□□□□□ -0.61
NEK4-204ENST00000487068 SMTNP53814 917 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms