RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 PIGOQ8TEQ8 1089 aa27.35■■□□□ 1.97
LIME1-206ENST00000487026 SUSD6Q92537 303 aa27.35■■□□□ 1.97
LIME1-206ENST00000487026 IGSF21Q96ID5 467 aa27.35■■□□□ 1.97
LIME1-206ENST00000487026 PHF7Q9BWX1 381 aaPredicted RBP27.35■■□□□ 1.97
LIME1-206ENST00000487026 ANKEF1Q9NU02 776 aa27.35■■□□□ 1.97
LIME1-206ENST00000487026 TRIOO75962 3097 aa27.35■■□□□ 1.97
LIME1-206ENST00000487026 POTEMA6NI47 508 aa27.34■■□□□ 1.97
LIME1-206ENST00000487026 CLASP2O75122 1294 aaKnown RBP27.34■■□□□ 1.97
LIME1-206ENST00000487026 MCM7P33993 719 aa27.34■■□□□ 1.97
LIME1-206ENST00000487026 SLC11A1P49279 550 aa27.34■■□□□ 1.97
LIME1-206ENST00000487026 ASAP3Q8TDY4 903 aa27.34■■□□□ 1.97
LIME1-206ENST00000487026 ARID2Q68CP9 1835 aa27.34■■□□□ 1.97
LIME1-206ENST00000487026 DDHD2O94830 711 aa27.33■■□□□ 1.97
LIME1-206ENST00000487026 PTENP60484 403 aa27.33■■□□□ 1.97
LIME1-206ENST00000487026 MXD4Q14582 209 aaPredicted RBP27.33■■□□□ 1.97
LIME1-206ENST00000487026 URGCPQ8TCY9 931 aa27.33■■□□□ 1.97
LIME1-206ENST00000487026 RSPH1Q8WYR4 309 aa27.33■■□□□ 1.97
LIME1-206ENST00000487026 CPB2Q96IY4 423 aa27.33■■□□□ 1.97
LIME1-206ENST00000487026 ZBP1Q9H171 429 aa27.33■■□□□ 1.97
LIME1-206ENST00000487026 RSAD1Q9HA92 442 aa27.33■■□□□ 1.97
LIME1-206ENST00000487026 CDH22Q9UJ99 828 aa27.33■■□□□ 1.97
LIME1-206ENST00000487026 HCFC2Q9Y5Z7 792 aa27.33■■□□□ 1.97
LIME1-206ENST00000487026 ERLIN2O94905 339 aa27.32■■□□□ 1.96
LIME1-206ENST00000487026 SAFBQ15424 915 aaKnown RBP eCLIP27.32■■□□□ 1.96
LIME1-206ENST00000487026 DDX53Q86TM3 631 aaKnown RBP27.32■■□□□ 1.96
LIME1-206ENST00000487026 SMG8Q8ND04 991 aaKnown RBP27.32■■□□□ 1.96
LIME1-206ENST00000487026 CCDC43Q96MW1 224 aaKnown RBP27.32■■□□□ 1.96
LIME1-206ENST00000487026 EIF2AQ9BY44 585 aaKnown RBP27.32■■□□□ 1.96
LIME1-206ENST00000487026 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.31■■□□□ 1.96
LIME1-206ENST00000487026 INO80B-WBP1J3KQ70 363 aa27.31■■□□□ 1.96
LIME1-206ENST00000487026 TSPAN1O60635 241 aa27.31■■□□□ 1.96
LIME1-206ENST00000487026 DGAT1O75907 488 aa27.31■■□□□ 1.96
LIME1-206ENST00000487026 POMCP01189 267 aa27.31■■□□□ 1.96
LIME1-206ENST00000487026 ARL2P36404 184 aa27.31■■□□□ 1.96
LIME1-206ENST00000487026 RARRES1P49788 294 aa27.31■■□□□ 1.96
LIME1-206ENST00000487026 CAPSQ13938 189 aa27.31■■□□□ 1.96
LIME1-206ENST00000487026 BMS1Q14692 1282 aaKnown RBP27.31■■□□□ 1.96
LIME1-206ENST00000487026 CBX2Q14781 532 aaPredicted RBP27.31■■□□□ 1.96
LIME1-206ENST00000487026 CASP10Q92851 521 aa27.31■■□□□ 1.96
LIME1-206ENST00000487026 C8orf76Q96K31 380 aa27.31■■□□□ 1.96
LIME1-206ENST00000487026 VN1R3Q9BXE9 311 aa27.31■■□□□ 1.96
LIME1-206ENST00000487026 RNF39Q9H2S5 420 aa27.31■■□□□ 1.96
LIME1-206ENST00000487026 SPATA31C1P0DKV0 1188 aa27.3■■□□□ 1.96
LIME1-206ENST00000487026 NCLP19338 710 aaKnown RBP27.3■■□□□ 1.96
LIME1-206ENST00000487026 SP100P23497 879 aaPredicted RBP27.3■■□□□ 1.96
LIME1-206ENST00000487026 TFDP1Q14186 410 aa27.3■■□□□ 1.96
LIME1-206ENST00000487026 ZNF174Q15697 407 aa27.3■■□□□ 1.96
LIME1-206ENST00000487026 MAEAQ7L5Y9 396 aa27.3■■□□□ 1.96
LIME1-206ENST00000487026 EDAQ92838 391 aa27.3■■□□□ 1.96
LIME1-206ENST00000487026 IPPQ9Y573 584 aa27.3■■□□□ 1.96
LIME1-206ENST00000487026 USO1O60763 962 aaKnown RBP27.29■■□□□ 1.96
LIME1-206ENST00000487026 ITGA4P13612 1032 aa27.29■■□□□ 1.96
LIME1-206ENST00000487026 HOXB8P17481 243 aaPredicted RBP27.29■■□□□ 1.96
LIME1-206ENST00000487026 GLRA2P23416 452 aa27.29■■□□□ 1.96
LIME1-206ENST00000487026 MBTD1Q05BQ5 628 aa27.29■■□□□ 1.96
LIME1-206ENST00000487026 HFE2Q6ZVN8 426 aa27.29■■□□□ 1.96
LIME1-206ENST00000487026 CATSPER3Q86XQ3 398 aa27.29■■□□□ 1.96
LIME1-206ENST00000487026 TMEM87AQ8NBN3 555 aa27.29■■□□□ 1.96
LIME1-206ENST00000487026 FAM193BQ96PV7 902 aaPredicted RBP27.29■■□□□ 1.96
LIME1-206ENST00000487026 POLR3FQ9H1D9 316 aaPredicted RBP27.29■■□□□ 1.96
LIME1-206ENST00000487026 GPRC5CQ9NQ84 441 aa27.29■■□□□ 1.96
LIME1-206ENST00000487026 ARIH1Q9Y4X5 557 aaPredicted RBP27.29■■□□□ 1.96
LIME1-206ENST00000487026 HES2Q9Y543 173 aa27.29■■□□□ 1.96
LIME1-206ENST00000487026 CNTNAP2Q9UHC6 1331 aa27.29■■□□□ 1.96
LIME1-206ENST00000487026 MED24O75448 989 aa27.28■■□□□ 1.96
LIME1-206ENST00000487026 ALDH2P05091 517 aa27.28■■□□□ 1.96
LIME1-206ENST00000487026 CTSAP10619 480 aa27.28■■□□□ 1.96
LIME1-206ENST00000487026 AMHR2Q16671 573 aa27.28■■□□□ 1.96
LIME1-206ENST00000487026 KANK3Q6NY19 840 aa27.28■■□□□ 1.96
LIME1-206ENST00000487026 NOTUMQ6P988 496 aa27.28■■□□□ 1.96
LIME1-206ENST00000487026 C12orf76Q8N812 135 aaPredicted RBP27.28■■□□□ 1.96
LIME1-206ENST00000487026 KIF2CQ99661 725 aa27.28■■□□□ 1.96
LIME1-206ENST00000487026 LLPHQ9BRT6 129 aaKnown RBP27.28■■□□□ 1.96
LIME1-206ENST00000487026 KANSL3Q9P2N6 904 aa27.28■■□□□ 1.96
LIME1-206ENST00000487026 FAN1Q9Y2M0 1017 aa27.28■■□□□ 1.96
LIME1-206ENST00000487026 SSBP05455 408 aaKnown RBP eCLIP27.27■■□□□ 1.96
LIME1-206ENST00000487026 WEE2P0C1S8 567 aa27.27■■□□□ 1.96
LIME1-206ENST00000487026 EPCAMP16422 314 aa27.27■■□□□ 1.96
LIME1-206ENST00000487026 AXLP30530 894 aa27.27■■□□□ 1.96
LIME1-206ENST00000487026 POU5F1BQ06416 359 aa27.27■■□□□ 1.96
LIME1-206ENST00000487026 NCBP1Q09161 790 aaKnown RBP27.27■■□□□ 1.96
LIME1-206ENST00000487026 TPRNQ4KMQ1 711 aa27.27■■□□□ 1.96
LIME1-206ENST00000487026 CDR2LQ86X02 465 aaPredicted RBP27.27■■□□□ 1.96
LIME1-206ENST00000487026 IFNLR1Q8IU57 520 aaPredicted RBP27.27■■□□□ 1.96
LIME1-206ENST00000487026 APOL6Q9BWW8 343 aa27.27■■□□□ 1.96
LIME1-206ENST00000487026 CARNS1A5YM72 827 aa27.26■■□□□ 1.95
LIME1-206ENST00000487026 NRP1O14786 923 aa27.26■■□□□ 1.95
LIME1-206ENST00000487026 B4GALT5O43286 388 aa27.26■■□□□ 1.95
LIME1-206ENST00000487026 XRCC6P12956 609 aaKnown RBP eCLIP27.26■■□□□ 1.95
LIME1-206ENST00000487026 ARF4P18085 180 aaPredicted RBP27.26■■□□□ 1.95
LIME1-206ENST00000487026 PCBP1Q15365 356 aaKnown RBP eCLIP27.26■■□□□ 1.956e-7■■■■□ 25.9
LIME1-206ENST00000487026 CNNM3Q8NE01 707 aa27.26■■□□□ 1.95
LIME1-206ENST00000487026 GAD1Q99259 594 aa27.26■■□□□ 1.95
LIME1-206ENST00000487026 CSRNP2Q9H175 543 aa27.26■■□□□ 1.95
LIME1-206ENST00000487026 FOXP1Q9H334 677 aaPredicted RBP27.26■■□□□ 1.95
LIME1-206ENST00000487026 MIOSQ9NXC5 875 aa27.26■■□□□ 1.95
LIME1-206ENST00000487026 IRAK3Q9Y616 596 aa27.26■■□□□ 1.95
LIME1-206ENST00000487026 ARL5CA6NH57 179 aa27.25■■□□□ 1.95
LIME1-206ENST00000487026 ZXDAP98168 799 aa27.25■■□□□ 1.95
LIME1-206ENST00000487026 RARS2Q5T160 578 aaKnown RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms