RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 UBN1Q9NPG3 1134 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 PAPOLBQ9NRJ5 636 aaKnown RBP6.1□□□□□ -1.43
SF1-217ENST00000486960 DACT1Q9NYF0 836 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 SRRDQ9UH36 339 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 SH3BGRL2Q9UJC5 107 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 EPN1Q9Y6I3 576 aaPredicted RBP6.1□□□□□ -1.43
SF1-217ENST00000486960 PTPN13Q12923 2485 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 LRRC37AA6NMS7 1700 aa6.1□□□□□ -1.43
SF1-217ENST00000486960 C17orf113A0A1B0GUU1 675 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 KLHL33A6NCF5 533 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 CCDC69A6NI79 296 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 B2RBV5 119 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 TPP1O14773 563 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 BACH1O14867 736 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 AHCYL1O43865 530 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 PPP1R12BO60237 982 aaPredicted RBP6.09□□□□□ -1.43
SF1-217ENST00000486960 NEMFO60524 1076 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 APBB3O95704 486 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 F12P00748 615 aaPredicted RBP6.09□□□□□ -1.43
SF1-217ENST00000486960 RPLP1P05386 114 aaKnown RBP6.09□□□□□ -1.43
SF1-217ENST00000486960 ZNF853P0CG23 659 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 FERP16591 822 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 POU3F2P20265 443 aaPredicted RBP6.09□□□□□ -1.43
SF1-217ENST00000486960 BTF3P20290 206 aaKnown RBP6.09□□□□□ -1.43
SF1-217ENST00000486960 ALDH1B1P30837 517 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 GRIK1P39086 918 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 ADH7P40394 386 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 CRKP46108 304 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 SEPHS1P49903 392 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 EIF4A2Q14240 407 aaKnown RBP6.09□□□□□ -1.43
SF1-217ENST00000486960 SEMA3AQ14563 771 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 RASA2Q15283 850 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 PCBP1Q15365 356 aaKnown RBP eCLIP6.09□□□□□ -1.43
SF1-217ENST00000486960 MEA1Q16626 185 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 LRRC26Q2I0M4 334 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 CRY2Q49AN0 593 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 C10orf76Q5T2E6 689 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 BNC2Q6ZN30 1099 aaPredicted RBP6.09□□□□□ -1.43
SF1-217ENST00000486960 HFE2Q6ZVN8 426 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 SLC9B2Q86UD5 537 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 CBARPQ8N350 705 aaPredicted RBP6.09□□□□□ -1.43
SF1-217ENST00000486960 NEK9Q8TD19 979 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 KISS1RQ969F8 398 aaPredicted RBP6.09□□□□□ -1.43
SF1-217ENST00000486960 CFAP36Q96G28 342 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 CDC6Q99741 560 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 MRPL4Q9BYD3 311 aaKnown RBP6.09□□□□□ -1.43
SF1-217ENST00000486960 VPS11Q9H270 941 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 TRIT1Q9H3H1 467 aaKnown RBP6.09□□□□□ -1.43
SF1-217ENST00000486960 OSBPL3Q9H4L5 887 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 PRDM12Q9H4Q4 367 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 TRPV4Q9HBA0 871 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 SEPT10Q9P0V9 454 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 MAP10Q9P2G4 905 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 KCNH4Q9UQ05 1017 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 C2CD2Q9Y426 696 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 ITPR1Q14643 2758 aa6.09□□□□□ -1.43
SF1-217ENST00000486960 A0A1W2PRU2 124 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 CCDC66A2RUB6 948 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 EIF3FO00303 357 aaPredicted RBP6.08□□□□□ -1.44
SF1-217ENST00000486960 NEMP1O14524 444 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 SGSM2O43147 1006 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 KLHL41O60662 606 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 SLITRK5O94991 958 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 ZBED1O96006 694 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 PF4P02776 101 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 PARP1P09874 1014 aaKnown RBP6.08□□□□□ -1.44
SF1-217ENST00000486960 ZBTB48P10074 688 aaPredicted RBP6.08□□□□□ -1.44
SF1-217ENST00000486960 IMPDH2P12268 514 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 ELNP15502 786 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 ZNF165P49910 485 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 MXI1P50539 228 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 CABP4P57796 275 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 LSM11P83369 360 aaKnown RBP eCLIP6.08□□□□□ -1.44
SF1-217ENST00000486960 FUT2Q10981 343 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 ANKDD1AQ495B1 522 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 UTP14CQ5TAP6 766 aaKnown RBP6.08□□□□□ -1.44
SF1-217ENST00000486960 FAM205BPQ63HN1 556 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 IQSEC1Q6DN90 963 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 SLC30A6Q6NXT4 461 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 GPR155Q7Z3F1 870 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 ZBTB33Q86T24 672 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 TRIM42Q8IWZ5 723 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 TBC1D21Q8IYX1 336 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 MYOCDQ8IZQ8 938 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 ESX1Q8N693 406 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 NAT8LQ8N9F0 302 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 TDRD7Q8NHU6 1098 aaKnown RBP6.08□□□□□ -1.44
SF1-217ENST00000486960 SLC35G2Q8TBE7 412 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 BRI3BPQ8WY22 251 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 RTF1Q92541 710 aaKnown RBP6.08□□□□□ -1.44
SF1-217ENST00000486960 MYO19Q96H55 970 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 FAM81BQ96LP2 452 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 TIGD1Q96MW7 591 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 TBCBQ99426 244 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 ARHGAP9Q9BRR9 750 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 TACO1Q9BSH4 297 aaKnown RBP6.08□□□□□ -1.44
SF1-217ENST00000486960 PI4K2AQ9BTU6 479 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 FSD1Q9BTV5 496 aa6.08□□□□□ -1.44
SF1-217ENST00000486960 TSPAN10Q9H1Z9 355 aaPredicted RBP6.08□□□□□ -1.44
SF1-217ENST00000486960 ZNF576Q9H609 170 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms