RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 EPS8L3Q8TE67 593 aaKnown RBP7.84□□□□□ -1.15
SMC4-217ENST00000485867 MORC4Q8TE76 937 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 DHX38Q92620 1227 aaKnown RBP7.84□□□□□ -1.15
SMC4-217ENST00000485867 WDR89Q96FK6 387 aaPredicted RBP7.84□□□□□ -1.15
SMC4-217ENST00000485867 DMRTB1Q96MA1 342 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 WDR11Q9BZH6 1224 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 ARMT1Q9H993 441 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 LRRC4CQ9HCJ2 640 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 ATP8A2Q9NTI2 1148 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 NYAP2Q9P242 653 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 FEM1BQ9UK73 627 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 MAP1BP46821 2468 aaKnown RBP7.84□□□□□ -1.16
SMC4-217ENST00000485867 BAHCC1Q9P281 2608 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 RBM47A0AV96 593 aaKnown RBP7.83□□□□□ -1.16
SMC4-217ENST00000485867 H0Y858 1186 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 NCK2O43639 380 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 LIG1P18858 919 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 AVPR2P30518 371 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 SIGLEC14Q08ET2 396 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 PTGISQ16647 500 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 OGFOD3Q6PK18 319 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 TP53INP2Q8IXH6 220 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 ASIC4Q96FT7 647 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 TLR9Q9NR96 1032 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 CYP39A1Q9NYL5 469 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 CRIM1Q9NZV1 1036 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 DMDP11532 3685 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 VPS13AQ96RL7 3174 aa7.83□□□□□ -1.16
SMC4-217ENST00000485867 ZBED9Q6R2W3 1325 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 RAD50Q92878 1312 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 ZNF292O60281 2723 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 KIAA1217Q5T5P2 1943 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 MED19A0JLT2 244 aaPredicted RBP7.82□□□□□ -1.16
SMC4-217ENST00000485867 LOC730098B7Z3J9 87 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 ZNF862O60290 1169 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 KPNA6O60684 536 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 SURF6O75683 361 aaKnown RBP7.82□□□□□ -1.16
SMC4-217ENST00000485867 MBD4O95243 580 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 CKBP12277 381 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 NBL1P41271 181 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 SLFN5Q08AF3 891 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 HYAL1Q12794 435 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 CBX2Q14781 532 aaPredicted RBP7.82□□□□□ -1.16
SMC4-217ENST00000485867 TTF1Q15361 905 aaPredicted RBP7.82□□□□□ -1.16
SMC4-217ENST00000485867 TKFCQ3LXA3 575 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 BRDTQ58F21 947 aaPredicted RBP7.82□□□□□ -1.16
SMC4-217ENST00000485867 MUM1L1Q5H9M0 696 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.82□□□□□ -1.16
SMC4-217ENST00000485867 AMOTL1Q8IY63 956 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 TMEM192Q8IY95 271 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 MYOCDQ8IZQ8 938 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 FLCNQ8NFG4 579 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 SSH3Q8TE77 659 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 CD207Q9UJ71 328 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 PCDHGC5Q9Y5F6 944 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 KIAA1671Q9BY89 1806 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 MYH7BA7E2Y1 1941 aa7.82□□□□□ -1.16
SMC4-217ENST00000485867 IGKV6D-41A0A0C4DH26 115 aa7.81□□□□□ -1.16
SMC4-217ENST00000485867 AMHP03971 560 aa7.81□□□□□ -1.16
SMC4-217ENST00000485867 ALAS1P13196 640 aa7.81□□□□□ -1.16
SMC4-217ENST00000485867 GTF2F1P35269 517 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMC4-217ENST00000485867 ALDH5A1P51649 535 aaPredicted RBP7.81□□□□□ -1.16
SMC4-217ENST00000485867 CHMP4BP1P59074 171 aa7.81□□□□□ -1.16
SMC4-217ENST00000485867 SESTD1Q86VW0 696 aa7.81□□□□□ -1.16
SMC4-217ENST00000485867 RPAP2Q8IXW5 612 aaPredicted RBP7.81□□□□□ -1.16
SMC4-217ENST00000485867 COPS5Q92905 334 aa7.81□□□□□ -1.16
SMC4-217ENST00000485867 FANCD2OSQ96PS1 177 aa7.81□□□□□ -1.16
SMC4-217ENST00000485867 KRT82Q9NSB4 513 aa7.81□□□□□ -1.16
SMC4-217ENST00000485867 CLIP2Q9UDT6 1046 aa7.81□□□□□ -1.16
SMC4-217ENST00000485867 NOP58Q9Y2X3 529 aaKnown RBP7.81□□□□□ -1.16
SMC4-217ENST00000485867 OTOGLQ3ZCN5 2332 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 LOC102724159A0A0B4J2E5 919 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 SOWAHDA6NJG2 315 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 TMEM232C9JQI7 657 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 NKRFO15226 690 aaKnown RBP eCLIP7.8□□□□□ -1.16
SMC4-217ENST00000485867 LINC01565O15544 149 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 BCAR3O75815 825 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 EYA4O95677 639 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 GSTP1P09211 210 aaKnown RBP7.8□□□□□ -1.16
SMC4-217ENST00000485867 CT47B1P0C2W7 299 aaPredicted RBP7.8□□□□□ -1.16
SMC4-217ENST00000485867 STAT2P52630 851 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 ATP8B2P98198 1209 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 PPP2R5BQ15173 497 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 PWP2Q15269 919 aaKnown RBP7.8□□□□□ -1.16
SMC4-217ENST00000485867 TRIM71Q2Q1W2 868 aaKnown RBP7.8□□□□□ -1.16
SMC4-217ENST00000485867 CTR9Q6PD62 1173 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 NSMFQ6X4W1 530 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 PDZD3Q86UT5 571 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 WFDC3Q8IUB2 231 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 FAM9BQ8IZU0 186 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 LRRC47Q8N1G4 583 aaKnown RBP7.8□□□□□ -1.16
SMC4-217ENST00000485867 AGBL5Q8NDL9 886 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 GMCL1P1Q8NEA9 526 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 ARHGAP45Q92619 1136 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 MKL1Q969V6 931 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 MSLNLQ96KJ4 702 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 YME1L1Q96TA2 773 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 LMAN2LQ9H0V9 348 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 ATXN3LQ9H3M9 355 aa7.8□□□□□ -1.16
SMC4-217ENST00000485867 SYNPO2Q9UMS6 1093 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms