RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 GATMP50440 423 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 EFNA5P52803 228 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 HTRA4P83105 476 aaPredicted RBP13.05□□□□□ -0.32
HPS4-214ENST00000485842 PRPF4BQ13523 1007 aaKnown RBP13.05□□□□□ -0.32
HPS4-214ENST00000485842 LONRF3Q496Y0 759 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 PAN2Q504Q3 1202 aaKnown RBP13.05□□□□□ -0.32
HPS4-214ENST00000485842 ZNF697Q5TEC3 545 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 PPP2R2DQ66LE6 453 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 PPP4R3CPQ6ZMV5 832 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 SFR1Q86XK3 245 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 CEP57L1Q8IYX8 460 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 SPIRE2Q8WWL2 714 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 PRIMPOLQ96LW4 560 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 FAM161BQ96MY7 647 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 PYM1Q9BRP8 204 aaKnown RBP13.05□□□□□ -0.32
HPS4-214ENST00000485842 TNMDQ9H2S6 317 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 FZD8Q9H461 694 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 GOLPH3LQ9H4A5 285 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 SLC28A3Q9HAS3 691 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 MAGEF1Q9HAY2 307 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 FAM105AQ9NUU6 356 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 TMEM161AQ9NX61 479 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 ARHGAP28Q9P2N2 729 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 SERTAD1Q9UHV2 236 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 INSL6Q9Y581 213 aa13.05□□□□□ -0.32
HPS4-214ENST00000485842 TTLL13PA6NNM8 815 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 ACKR2O00590 384 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 TRAK2O60296 914 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 ARHGEF15O94989 841 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 NPTXRO95502 500 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 FGFR1P11362 822 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 SYKP43405 635 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 AFMP43652 599 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 RAB27AP51159 221 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 NDUFA8P51970 172 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 ZNF131P52739 623 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 NCKAP1LP55160 1127 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 ASIC1P78348 528 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 AMPD3Q01432 767 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 FAM187BQ17R55 369 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 UBXN11Q5T124 520 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 Q7L0L9 218 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 TAS1R3Q7RTX0 852 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 GRAMD1CQ8IYS0 662 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 LPPQ93052 612 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 DNAJC19Q96DA6 116 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 CCDC51Q96ER9 411 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 EIF2AQ9BY44 585 aaKnown RBP13.04□□□□□ -0.32
HPS4-214ENST00000485842 TRIM9Q9C026 710 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 LRRC27Q9C0I9 530 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 KBTBD4Q9NVX7 518 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 RNF216Q9NWF9 866 aaPredicted RBP13.04□□□□□ -0.32
HPS4-214ENST00000485842 HPSEQ9Y251 543 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 COL4A6Q14031 1691 aa13.04□□□□□ -0.32
HPS4-214ENST00000485842 A0A0U1RQF3 1178 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 LINC01553A4QN01 128 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 TBKBP1A7MCY6 615 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 H0YCG3 227 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 N4BP3O15049 544 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 ACTN4O43707 911 aaKnown RBP13.03□□□□□ -0.32
HPS4-214ENST00000485842 DGKIO75912 1065 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 MAPTP10636 758 aaKnown RBP13.03□□□□□ -0.32
HPS4-214ENST00000485842 SKIP12755 728 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 ATF7P17544 494 aaPredicted RBP13.03□□□□□ -0.32
HPS4-214ENST00000485842 GAP43P17677 238 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 CASP1P29466 404 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 NMT1P30419 496 aaKnown RBP13.03□□□□□ -0.32
HPS4-214ENST00000485842 FAM189BP81408 668 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 STRN3Q13033 797 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 BTG3Q14201 252 aaPredicted RBP13.03□□□□□ -0.32
HPS4-214ENST00000485842 CSPP1Q1MSJ5 1256 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 EEF1DP3Q658K8 133 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 SLC27A1Q6PCB7 646 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 HAUS6Q7Z4H7 955 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 SPRED2Q7Z698 418 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 FAM178BQ8IXR5 827 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 CRIPAKQ8N1N5 446 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 FIBCD1Q8N539 461 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 TMEM161BQ8NDZ6 487 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 HELQQ8TDG4 1101 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 APOL6Q9BWW8 343 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 MRPL4Q9BYD3 311 aaKnown RBP13.03□□□□□ -0.32
HPS4-214ENST00000485842 TRIM6Q9C030 488 aaPredicted RBP13.03□□□□□ -0.32
HPS4-214ENST00000485842 BLZF1Q9H2G9 400 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 TTYH1Q9H313 450 aaPredicted RBP13.03□□□□□ -0.32
HPS4-214ENST00000485842 PDZD7Q9H5P4 517 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 TMEM134Q9H6X4 195 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 ELAC1Q9H777 363 aaKnown RBP13.03□□□□□ -0.32
HPS4-214ENST00000485842 CERS4Q9HA82 394 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 RC3H2Q9HBD1 1191 aaKnown RBP13.03□□□□□ -0.32
HPS4-214ENST00000485842 PANK4Q9NVE7 773 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 TBC1D7Q9P0N9 293 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 KCNG1Q9UIX4 513 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 PCDHB2Q9Y5E7 798 aa13.03□□□□□ -0.32
HPS4-214ENST00000485842 FNDC1Q4ZHG4 1894 aaPredicted RBP13.03□□□□□ -0.32
HPS4-214ENST00000485842 KIAA1671Q9BY89 1806 aa13.02□□□□□ -0.32
HPS4-214ENST00000485842 NLRC5Q86WI3 1866 aa13.02□□□□□ -0.32
HPS4-214ENST00000485842 TMEM265A0A087WTH1 108 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 FAM237AA0A1B0GTK4 181 aa13.02□□□□□ -0.33
HPS4-214ENST00000485842 A0A1B0GUA9 196 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms