RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 ASAP3Q8TDY4 903 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 MYLIPQ8WY64 445 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 KCNN1Q92952 543 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 OSMRQ99650 979 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 EIF2AK1Q9BQI3 630 aaKnown RBP6.4□□□□□ -1.38
CUX1-208ENST00000485792 LXNQ9BS40 222 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 IFIH1Q9BYX4 1025 aaKnown RBP6.4□□□□□ -1.38
CUX1-208ENST00000485792 ZSWIM4Q9H7M6 989 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 IFT122Q9HBG6 1241 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 POLD4Q9HCU8 107 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 TUFT1Q9NNX1 390 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 GPRC5CQ9NQ84 441 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 CYP26B1Q9NR63 512 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 ANKEF1Q9NU02 776 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 DBR1Q9UK59 544 aaKnown RBP6.4□□□□□ -1.38
CUX1-208ENST00000485792 PADI3Q9ULW8 664 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 USP20Q9Y2K6 914 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 STXBP5LQ9Y2K9 1186 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 NOC2LQ9Y3T9 749 aaKnown RBP6.4□□□□□ -1.38
CUX1-208ENST00000485792 KIF3AQ9Y496 699 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.4□□□□□ -1.38
CUX1-208ENST00000485792 TRPV2Q9Y5S1 764 aa6.4□□□□□ -1.38
CUX1-208ENST00000485792 DOCK8Q8NF50 2099 aa6.4□□□□□ -1.39
CUX1-208ENST00000485792 SCN1AP35498 2009 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 LINC01553A4QN01 128 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 C9IYK1 514 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 K7ELQ4 463 aaPredicted RBP6.39□□□□□ -1.39
CUX1-208ENST00000485792 GAS2O43903 313 aaKnown RBP6.39□□□□□ -1.39
CUX1-208ENST00000485792 DKC1O60832 514 aaKnown RBP eCLIP6.39□□□□□ -1.39
CUX1-208ENST00000485792 DGKIO75912 1065 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 BAG4O95429 457 aaKnown RBP6.39□□□□□ -1.39
CUX1-208ENST00000485792 OR52Z1P0C646 297 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 SYT1P21579 422 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 EIF4BP23588 611 aaKnown RBP6.39□□□□□ -1.39
CUX1-208ENST00000485792 IGFBP6P24592 240 aaPredicted RBP6.39□□□□□ -1.39
CUX1-208ENST00000485792 YWHABP31946 246 aaKnown RBP6.39□□□□□ -1.39
CUX1-208ENST00000485792 GPC3P51654 580 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 TAP1Q03518 808 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 CAMK1Q14012 370 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 KIZQ2M2Z5 673 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 TTC38Q5R3I4 469 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 UBXN11Q5T124 520 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 LARP1BQ659C4 914 aaKnown RBP6.39□□□□□ -1.39
CUX1-208ENST00000485792 ARL6IP4Q66PJ3 421 aaKnown RBP6.39□□□□□ -1.39
CUX1-208ENST00000485792 NCAPH2Q6IBW4 605 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 EFCAB12Q6NXP0 572 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 BRAPQ7Z569 592 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 FERMT3Q86UX7 667 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 EXOC8Q8IYI6 725 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 KCTD17Q8N5Z5 321 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 FAM184AQ8NB25 1140 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 SEPT8Q92599 483 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 CLP1Q92989 425 aaKnown RBP6.39□□□□□ -1.39
CUX1-208ENST00000485792 CDX2Q99626 313 aaPredicted RBP6.39□□□□□ -1.39
CUX1-208ENST00000485792 RAD9AQ99638 391 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 FTHL17Q9BXU8 183 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 NFKBIZQ9BYH8 718 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 ZNF576Q9H609 170 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 CERS4Q9HA82 394 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 RGS18Q9NS28 235 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 SAMM50Q9Y512 469 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 PCDHGC5Q9Y5F6 944 aa6.39□□□□□ -1.39
CUX1-208ENST00000485792 C5orf67F2Z3F1 127 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 B4GALT5O43286 388 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 SLC26A4O43511 780 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 ZNF623O75123 536 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 DARSP14868 501 aaKnown RBP6.38□□□□□ -1.39
CUX1-208ENST00000485792 ATP2B1P20020 1258 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 PDCP20941 246 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 DNAJB1P25685 340 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 ARL2P36404 184 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 TXKP42681 527 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 ABL2P42684 1182 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 RARRES1P49788 294 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 NLRP11P59045 1033 aaKnown RBP6.38□□□□□ -1.39
CUX1-208ENST00000485792 ERVK-21P61565 698 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 TBC1D8BQ0IIM8 1120 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 GRB10Q13322 594 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 CAPSQ13938 189 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 MTERF2Q49AM1 385 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 FAM117BQ6P1L5 589 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 LRRC55Q6ZSA7 311 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 TAS1R3Q7RTX0 852 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 ZNF410Q86VK4 478 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 TMEM173Q86WV6 379 aaPredicted RBP6.38□□□□□ -1.39
CUX1-208ENST00000485792 PIGOQ8TEQ8 1089 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 GDPD5Q8WTR4 605 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 BCL7CQ8WUZ0 217 aaPredicted RBP6.38□□□□□ -1.39
CUX1-208ENST00000485792 TMEM143Q96AN5 459 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 TIFAQ96CG3 184 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 FIZ1Q96SL8 496 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 JPH2Q9BR39 696 aaPredicted RBP6.38□□□□□ -1.39
CUX1-208ENST00000485792 C17orf80Q9BSJ5 609 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 KIFC3Q9BVG8 833 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 FGFBP2Q9BYJ0 223 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 IKZF4Q9H2S9 585 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 PRDM12Q9H4Q4 367 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 ELAC1Q9H777 363 aaKnown RBP6.38□□□□□ -1.39
CUX1-208ENST00000485792 BLOC1S4Q9NUP1 217 aa6.38□□□□□ -1.39
CUX1-208ENST00000485792 ST3GAL5Q9UNP4 418 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms