RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 NEMFO60524 1076 aa19.11■□□□□ 0.65
SMC4-216ENST00000485645 JAK2O60674 1132 aa19.11■□□□□ 0.65
SMC4-216ENST00000485645 LYPLA2O95372 231 aa19.11■□□□□ 0.65
SMC4-216ENST00000485645 HOXA11P31270 313 aaPredicted RBP19.11■□□□□ 0.65
SMC4-216ENST00000485645 FOSBP53539 338 aa19.11■□□□□ 0.65
SMC4-216ENST00000485645 GIT2Q14161 759 aa19.11■□□□□ 0.65
SMC4-216ENST00000485645 MXD4Q14582 209 aaPredicted RBP19.11■□□□□ 0.65
SMC4-216ENST00000485645 AGMOQ6ZNB7 445 aa19.11■□□□□ 0.65
SMC4-216ENST00000485645 HSD17B14Q9BPX1 270 aa19.11■□□□□ 0.65
SMC4-216ENST00000485645 TTC12Q9H892 705 aaPredicted RBP19.11■□□□□ 0.65
SMC4-216ENST00000485645 RSAD1Q9HA92 442 aa19.11■□□□□ 0.65
SMC4-216ENST00000485645 KANSL3Q9P2N6 904 aa19.11■□□□□ 0.65
SMC4-216ENST00000485645 DNAJB4Q9UDY4 337 aa19.11■□□□□ 0.65
SMC4-216ENST00000485645 CNTNAP2Q9UHC6 1331 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 ERLIN2O94905 339 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 CTSAP10619 480 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 HOXD11P31277 338 aaPredicted RBP19.1■□□□□ 0.65
SMC4-216ENST00000485645 TXKP42681 527 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 SLC11A1P49279 550 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 ZXDAP98168 799 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 ITIH3Q06033 890 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 PCBP1Q15365 356 aaKnown RBP eCLIP19.1■□□□□ 0.656e-13■■□□□ 12.1
SMC4-216ENST00000485645 UBXN11Q5T124 520 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 CES5AQ6NT32 575 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 TRIM67Q6ZTA4 783 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 ZNF280BQ86YH2 543 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 CNNM3Q8NE01 707 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 CCDC43Q96MW1 224 aaKnown RBP19.1■□□□□ 0.65
SMC4-216ENST00000485645 FAM193BQ96PV7 902 aaPredicted RBP19.1■□□□□ 0.65
SMC4-216ENST00000485645 KCNH6Q9H252 994 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 XPNPEP1Q9NQW7 623 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 ANKEF1Q9NU02 776 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 IRAK3Q9Y616 596 aa19.1■□□□□ 0.65
SMC4-216ENST00000485645 ARID2Q68CP9 1835 aa19.09■□□□□ 0.65
SMC4-216ENST00000485645 DGAT1O75907 488 aa19.09■□□□□ 0.65
SMC4-216ENST00000485645 NCLP19338 710 aaKnown RBP19.09■□□□□ 0.65
SMC4-216ENST00000485645 AXLP30530 894 aa19.09■□□□□ 0.65
SMC4-216ENST00000485645 PTENP60484 403 aa19.09■□□□□ 0.65
SMC4-216ENST00000485645 POU5F1BQ06416 359 aa19.09■□□□□ 0.65
SMC4-216ENST00000485645 NCBP1Q09161 790 aaKnown RBP19.09■□□□□ 0.65
SMC4-216ENST00000485645 TFDP1Q14186 410 aa19.09■□□□□ 0.65
SMC4-216ENST00000485645 BCL7CQ8WUZ0 217 aaPredicted RBP19.09■□□□□ 0.65
SMC4-216ENST00000485645 AUTS2Q8WXX7 1259 aa19.09■□□□□ 0.65
SMC4-216ENST00000485645 ADAM7Q9H2U9 754 aa19.09■□□□□ 0.65
SMC4-216ENST00000485645 UBN1Q9NPG3 1134 aa19.09■□□□□ 0.65
SMC4-216ENST00000485645 STK39Q9UEW8 545 aa19.09■□□□□ 0.65
SMC4-216ENST00000485645 TMEM221A6NGB7 291 aa19.08■□□□□ 0.64
SMC4-216ENST00000485645 INO80B-WBP1J3KQ70 363 aa19.08■□□□□ 0.64
SMC4-216ENST00000485645 M0R296 226 aa19.08■□□□□ 0.64
SMC4-216ENST00000485645 WNT7AO00755 349 aa19.08■□□□□ 0.64
SMC4-216ENST00000485645 DDHD2O94830 711 aa19.08■□□□□ 0.64
SMC4-216ENST00000485645 ALDH2P05091 517 aa19.08■□□□□ 0.64
SMC4-216ENST00000485645 NOTUMQ6P988 496 aa19.08■□□□□ 0.64
SMC4-216ENST00000485645 BMP8AQ7Z5Y6 402 aa19.08■□□□□ 0.64
SMC4-216ENST00000485645 NECTIN4Q96NY8 510 aa19.08■□□□□ 0.64
SMC4-216ENST00000485645 MTMR9Q96QG7 549 aa19.08■□□□□ 0.64
SMC4-216ENST00000485645 TMEM175Q9BSA9 504 aa19.08■□□□□ 0.64
SMC4-216ENST00000485645 FAN1Q9Y2M0 1017 aa19.08■□□□□ 0.64
SMC4-216ENST00000485645 NR2E1Q9Y466 385 aa19.08■□□□□ 0.64
SMC4-216ENST00000485645 B4GALT3O60512 393 aa19.07■□□□□ 0.64
SMC4-216ENST00000485645 TSPAN1O60635 241 aa19.07■□□□□ 0.64
SMC4-216ENST00000485645 POMCP01189 267 aa19.07■□□□□ 0.64
SMC4-216ENST00000485645 ITGA4P13612 1032 aa19.07■□□□□ 0.64
SMC4-216ENST00000485645 SP100P23497 879 aaPredicted RBP19.07■□□□□ 0.64
SMC4-216ENST00000485645 AFF1P51825 1210 aaKnown RBP19.07■□□□□ 0.64
SMC4-216ENST00000485645 SAFBQ15424 915 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMC4-216ENST00000485645 PPP4R3CPQ6ZMV5 832 aa19.07■□□□□ 0.64
SMC4-216ENST00000485645 IFNLR1Q8IU57 520 aaPredicted RBP19.07■□□□□ 0.64
SMC4-216ENST00000485645 SMG8Q8ND04 991 aaKnown RBP19.07■□□□□ 0.64
SMC4-216ENST00000485645 PIGOQ8TEQ8 1089 aa19.07■□□□□ 0.64
SMC4-216ENST00000485645 PBXIP1Q96AQ6 731 aa19.07■□□□□ 0.64
SMC4-216ENST00000485645 CCDC51Q96ER9 411 aa19.07■□□□□ 0.64
SMC4-216ENST00000485645 DZANK1Q9NVP4 752 aa19.07■□□□□ 0.64
SMC4-216ENST00000485645 CDH22Q9UJ99 828 aa19.07■□□□□ 0.64
SMC4-216ENST00000485645 IPPQ9Y573 584 aa19.07■□□□□ 0.64
SMC4-216ENST00000485645 ZNF318Q5VUA4 2279 aa19.07■□□□□ 0.64
SMC4-216ENST00000485645 SEC24BO95487 1268 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 XRCC6P12956 609 aaKnown RBP eCLIP19.06■□□□□ 0.64
SMC4-216ENST00000485645 ATP2B1P20020 1258 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 ARL2P36404 184 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 MTHFRP42898 656 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 RARRES1P49788 294 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 SIGLEC14Q08ET2 396 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 CAPSQ13938 189 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 RARS2Q5T160 578 aaKnown RBP19.06■□□□□ 0.64
SMC4-216ENST00000485645 PPFIBP1Q86W92 1011 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 ASAP3Q8TDY4 903 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 CPB2Q96IY4 423 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 FBXL18Q96ME1 805 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 RIPOR3Q96MK2 946 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 VN1R3Q9BXE9 311 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 EIF2AQ9BY44 585 aaKnown RBP19.06■□□□□ 0.64
SMC4-216ENST00000485645 CSRNP2Q9H175 543 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 POMKQ9H5K3 350 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 TSHZ2Q9NRE2 1034 aa19.06■□□□□ 0.64
SMC4-216ENST00000485645 POTEMA6NI47 508 aa19.05■□□□□ 0.64
SMC4-216ENST00000485645 NRP1O14786 923 aa19.05■□□□□ 0.64
SMC4-216ENST00000485645 EPCAMP16422 314 aa19.05■□□□□ 0.64
SMC4-216ENST00000485645 MCM7P33993 719 aa19.05■□□□□ 0.64
SMC4-216ENST00000485645 GUCY1B3Q02153 619 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms