RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	C11orf74	Q86VG3	221 aa		5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	GSPT2	Q8IYD1	628 aa	Known RBP	5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	SCLY	Q96I15	445 aa		5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	SLC5A4	Q9NY91	659 aa		5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	SAMD15	Q9P1V8	674 aa		5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	G3BP2	Q9UN86	482 aa	Known RBP	5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	NUB1	Q9Y5A7	615 aa		5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	WASHC2C	Q9Y4E1	1318 aa		5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	PHLDB1	Q86UU1	1377 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	E2F8	A0AVK6	867 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	BLACE	A4D250	179 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	FAM47E-STBD1	D6RA91	191 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	ARVCF	O00192	962 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	GPR39	O43194	453 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	RASGRP1	O95267	797 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	STAT5B	P51692	787 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	ACAP1	Q15027	740 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	ELAVL1	Q15717	326 aa	Known RBP	5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	ARHGAP44	Q17R89	818 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	PIK3R6	Q5UE93	754 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	TMEM200B	Q69YZ2	307 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	LBX2	Q6XYB7	198 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	HTR3D	Q70Z44	454 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	ANKS1A	Q92625	1134 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	RABGGTA	Q92696	567 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	PGBD4	Q96DM1	585 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	CD244	Q9BZW8	370 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	ARHGAP28	Q9P2N2	729 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	TRAF6	Q9Y4K3	522 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024	PCDHA9	Q9Y5H5	950 aa		5.18	□□□□□ -1.58
VPS8-223	ENST00000485024		A0A0G2JNJ9	132 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	DNAJC9-AS1	A6NH13	148 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	WNT9A	O14904	365 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	ULK1	O75385	1050 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	ALDH1L1	O75891	902 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	GNAT1	P11488	350 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	KRTAP5-9	P26371	169 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	ST5	P78524	1137 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	CD83	Q01151	205 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	ZNF460	Q14592	562 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	STAT4	Q14765	748 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	PCBP1	Q15365	356 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	KCNT2	Q6UVM3	1135 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	CCAR1	Q8IX12	1150 aa	Known RBP	5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	KCNJ15	Q99712	375 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	CELF4	Q9BZC1	486 aa	Known RBP	5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	MTFR1L	Q9H019	292 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024		Q9UFV3	132 aa		5.17	□□□□□ -1.58
VPS8-223	ENST00000485024	F2	P00734	622 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	PYGM	P11217	842 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	BPI	P17213	487 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	HOXB6	P17509	224 aa	Known RBP	5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	GRK2	P25098	689 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	GRK3	P35626	688 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	EVA1C	P58658	441 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	IL2	P60568	153 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	SPIRE1	Q08AE8	756 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	FAM50A	Q14320	339 aa	Known RBP	5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	KANK2	Q63ZY3	851 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	PASD1	Q8IV76	773 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	SH3RF2	Q8TEC5	729 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	FBXW5	Q969U6	566 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	MNT	Q99583	582 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	CYP4F11	Q9HBI6	524 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	INCENP	Q9NQS7	918 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	PCDHA8	Q9Y5H6	950 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	EID1	Q9Y6B2	187 aa		5.16	□□□□□ -1.58
VPS8-223	ENST00000485024	ASXL2	Q76L83	1435 aa		5.15	□□□□□ -1.58
VPS8-223	ENST00000485024	FAM83G	A6ND36	823 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	CBX4	O00257	560 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	KIF3B	O15066	747 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	PTGS1	P23219	599 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	MC4R	P32245	332 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	SMAD3	P84022	425 aa	Known RBP	5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	ITK	Q08881	620 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	TTF1	Q15361	905 aa	Predicted RBP	5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	C16orf59	Q7L2K0	433 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	C1QL2	Q7Z5L3	287 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	STRA8	Q7Z7C7	330 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	FMNL3	Q8IVF7	1028 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	SRRM1	Q8IYB3	904 aa	Known RBP	5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	IGSF22	Q8N9C0	903 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	BOLL	Q8N9W6	283 aa	Known RBP	5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	CHST14	Q8NCH0	376 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	LRFN3	Q9BTN0	628 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	FAM126A	Q9BYI3	521 aa	Predicted RBP	5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	GALNT8	Q9NY28	637 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	INSL6	Q9Y581	213 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	LTBP4	Q8N2S1	1624 aa		5.15	□□□□□ -1.59
VPS8-223	ENST00000485024	CENPVL1	A0A0U1RR11	272 aa		5.14	□□□□□ -1.59
VPS8-223	ENST00000485024	FAM90A27P	A6NNH2	459 aa		5.14	□□□□□ -1.59
VPS8-223	ENST00000485024	SOD2	P04179	222 aa		5.14	□□□□□ -1.59
VPS8-223	ENST00000485024	U2AF1L5	P0DN76	240 aa	Predicted RBP	5.14	□□□□□ -1.59
VPS8-223	ENST00000485024	ZEB1	P37275	1124 aa	Predicted RBP	5.14	□□□□□ -1.59
VPS8-223	ENST00000485024	LSS	P48449	732 aa		5.14	□□□□□ -1.59
VPS8-223	ENST00000485024	NEK2	P51955	445 aa		5.14	□□□□□ -1.59
VPS8-223	ENST00000485024	TMPRSS15	P98073	1019 aa		5.14	□□□□□ -1.59
VPS8-223	ENST00000485024	U2AF1	Q01081	240 aa	Known RBP eCLIP	5.14	□□□□□ -1.59
VPS8-223	ENST00000485024	HLTF	Q14527	1009 aa	Known RBP eCLIP	5.14	□□□□□ -1.59
VPS8-223	ENST00000485024	PPP2R5A	Q15172	486 aa		5.14	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms