RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 APOL6Q9BWW8 343 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 C2orf40Q9H1Z8 148 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 BLOC1S4Q9NUP1 217 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 RWDD3Q9Y3V2 267 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 COL6A3P12111 3177 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 EYSQ5T1H1 3165 aa17.93■□□□□ 0.46
DDR1-246ENST00000485023 RALGAPA2Q2PPJ7 1873 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 SPTLC2O15270 562 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 NPTXRO95502 500 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 EOMESO95936 686 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 SKIP12755 728 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 TXLNAP40222 546 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 PBX3P40426 434 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 NPTX2P47972 431 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 DMP1Q13316 513 aaPredicted RBP17.92■□□□□ 0.46
DDR1-246ENST00000485023 SKIV2LQ15477 1246 aaKnown RBP17.92■□□□□ 0.46
DDR1-246ENST00000485023 MAPK6Q16659 721 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 LRRC55Q6ZSA7 311 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 RAD54LQ92698 747 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 CHAMP1Q96JM3 812 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 C11orf84Q9BUA3 381 aaPredicted RBP17.92■□□□□ 0.46
DDR1-246ENST00000485023 TRAIPQ9BWF2 469 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 TRIM6Q9C030 488 aaPredicted RBP17.92■□□□□ 0.46
DDR1-246ENST00000485023 CCSER1Q9C0I3 900 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 CCDC113Q9H0I3 377 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 ALG13Q9NP73 1137 aaKnown RBP17.92■□□□□ 0.46
DDR1-246ENST00000485023 PRDM6Q9NQX0 595 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 PRMT7Q9NVM4 692 aaPredicted RBP17.92■□□□□ 0.46
DDR1-246ENST00000485023 HES2Q9Y543 173 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 IPPQ9Y573 584 aa17.92■□□□□ 0.46
DDR1-246ENST00000485023 FNDC1Q4ZHG4 1894 aaPredicted RBP17.91■□□□□ 0.46
DDR1-246ENST00000485023 GRM6O15303 877 aa17.91■□□□□ 0.46
DDR1-246ENST00000485023 SLC26A4O43511 780 aa17.91■□□□□ 0.46
DDR1-246ENST00000485023 KRT18P05783 430 aaKnown RBP17.91■□□□□ 0.46
DDR1-246ENST00000485023 PDIA4P13667 645 aaKnown RBP17.91■□□□□ 0.46
DDR1-246ENST00000485023 GUCY2CP25092 1073 aa17.91■□□□□ 0.46
DDR1-246ENST00000485023 AXLP30530 894 aa17.91■□□□□ 0.46
DDR1-246ENST00000485023 DNM1Q05193 864 aaKnown RBP17.91■□□□□ 0.46
DDR1-246ENST00000485023 PRPF4BQ13523 1007 aaKnown RBP17.91■□□□□ 0.46
DDR1-246ENST00000485023 PCBP1Q15365 356 aaKnown RBP eCLIP17.91■□□□□ 0.46
DDR1-246ENST00000485023 GLB1LQ6UWU2 654 aa17.91■□□□□ 0.46
DDR1-246ENST00000485023 KLHL23Q8NBE8 558 aa17.91■□□□□ 0.46
DDR1-246ENST00000485023 SMG8Q8ND04 991 aaKnown RBP17.91■□□□□ 0.46
DDR1-246ENST00000485023 PGBD4Q96DM1 585 aa17.91■□□□□ 0.46
DDR1-246ENST00000485023 REEP2Q9BRK0 252 aa17.91■□□□□ 0.46
DDR1-246ENST00000485023 PANK2Q9BZ23 570 aa17.91■□□□□ 0.46
DDR1-246ENST00000485023 FZD8Q9H461 694 aa17.91■□□□□ 0.46
DDR1-246ENST00000485023 NXF3Q9H4D5 531 aaKnown RBP17.91■□□□□ 0.46
DDR1-246ENST00000485023 CWH43Q9H720 699 aa17.91■□□□□ 0.46
DDR1-246ENST00000485023 KMT5AQ9NQR1 393 aa17.91■□□□□ 0.46
DDR1-246ENST00000485023 CCDC39Q9UFE4 941 aa17.91■□□□□ 0.46
DDR1-246ENST00000485023 CNTNAP2Q9UHC6 1331 aa17.91■□□□□ 0.46
DDR1-246ENST00000485023 C5orf67F2Z3F1 127 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 SLC16A4O15374 487 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 ZNF623O75123 536 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 ITGA4P13612 1032 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 ARSHQ5FYA8 562 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 PPP4R3CPQ6ZMV5 832 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 AGMOQ6ZNB7 445 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 THNSL1Q8IYQ7 743 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 KCTD17Q8N5Z5 321 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 COLGALT1Q8NBJ5 622 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 LARP4BQ92615 738 aaKnown RBP17.9■□□□□ 0.46
DDR1-246ENST00000485023 CCDC51Q96ER9 411 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 GBP3Q9H0R5 595 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 RNF39Q9H2S5 420 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 ZHX3Q9H4I2 956 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 RSAD1Q9HA92 442 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 ZDHHC9Q9Y397 364 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 PCDHB12Q9Y5F1 795 aa17.9■□□□□ 0.46
DDR1-246ENST00000485023 YEATS4O95619 227 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 BRD1O95696 1058 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 ITGB1P05556 798 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 RB1P06400 928 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 LAG3P18627 525 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 NCLP19338 710 aaKnown RBP17.89■□□□□ 0.45
DDR1-246ENST00000485023 POU3F3P20264 500 aaPredicted RBP17.89■□□□□ 0.45
DDR1-246ENST00000485023 AFF1P51825 1210 aaKnown RBP17.89■□□□□ 0.45
DDR1-246ENST00000485023 EFNA5P52803 228 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 PTPROQ16827 1216 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 NOMO2Q5JPE7 1267 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 RRAGBQ5VZM2 374 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 SLC27A1Q6PCB7 646 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 PDILTQ8N807 584 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 MRPL38Q96DV4 380 aaKnown RBP17.89■□□□□ 0.45
DDR1-246ENST00000485023 PRIMPOLQ96LW4 560 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 TIPINQ9BVW5 301 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 PLVAPQ9BX97 442 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 MRPL9Q9BYD2 267 aaKnown RBP17.89■□□□□ 0.45
DDR1-246ENST00000485023 PDZD7Q9H5P4 517 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 AAASQ9NRG9 546 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 PHLPP2Q6ZVD8 1323 aa17.89■□□□□ 0.45
DDR1-246ENST00000485023 TRANK1O15050 2925 aa17.88■□□□□ 0.45
DDR1-246ENST00000485023 A0A087X0B3 334 aa17.88■□□□□ 0.45
DDR1-246ENST00000485023 A0A1B0GUA9 196 aa17.88■□□□□ 0.45
DDR1-246ENST00000485023 K7ERI5 159 aa17.88■□□□□ 0.45
DDR1-246ENST00000485023 ACKR2O00590 384 aa17.88■□□□□ 0.45
DDR1-246ENST00000485023 ZC3H11AO75152 810 aaKnown RBP eCLIP17.88■□□□□ 0.45
DDR1-246ENST00000485023 PPP6R2O75170 966 aa17.88■□□□□ 0.45
DDR1-246ENST00000485023 OFD1O75665 1012 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms