RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 PCDHB12Q9Y5F1 795 aa21.14■□□□□ 0.97
SNX17-206ENST00000484886 PRKCBP05771 671 aa21.13■□□□□ 0.97
SNX17-206ENST00000484886 ARF4P18085 180 aaPredicted RBP21.13■□□□□ 0.97
SNX17-206ENST00000484886 SLC12A3P55017 1021 aa21.13■□□□□ 0.97
SNX17-206ENST00000484886 PEX3P56589 373 aa21.13■□□□□ 0.97
SNX17-206ENST00000484886 AMHR2Q16671 573 aa21.13■□□□□ 0.97
SNX17-206ENST00000484886 GLB1LQ6UWU2 654 aa21.13■□□□□ 0.97
SNX17-206ENST00000484886 GPBP1Q86WP2 473 aa21.13■□□□□ 0.97
SNX17-206ENST00000484886 TIPINQ9BVW5 301 aa21.13■□□□□ 0.97
SNX17-206ENST00000484886 PLVAPQ9BX97 442 aa21.13■□□□□ 0.97
SNX17-206ENST00000484886 C5orf67F2Z3F1 127 aa21.12■□□□□ 0.97
SNX17-206ENST00000484886 SPTLC2O15270 562 aa21.12■□□□□ 0.97
SNX17-206ENST00000484886 KRT18P05783 430 aaKnown RBP21.12■□□□□ 0.97
SNX17-206ENST00000484886 LINC00271P0C7V0 271 aa21.12■□□□□ 0.97
SNX17-206ENST00000484886 POU3F3P20264 500 aaPredicted RBP21.12■□□□□ 0.97
SNX17-206ENST00000484886 GUCY2CP25092 1073 aa21.12■□□□□ 0.97
SNX17-206ENST00000484886 EFNA5P52803 228 aa21.12■□□□□ 0.97
SNX17-206ENST00000484886 PRPF4BQ13523 1007 aaKnown RBP21.12■□□□□ 0.97
SNX17-206ENST00000484886 UBXN11Q5T124 520 aa21.12■□□□□ 0.97
SNX17-206ENST00000484886 USP49Q70CQ1 688 aa21.12■□□□□ 0.97
SNX17-206ENST00000484886 CDR2LQ86X02 465 aaPredicted RBP21.12■□□□□ 0.97
SNX17-206ENST00000484886 LINC00301Q8NCQ3 95 aa21.12■□□□□ 0.97
SNX17-206ENST00000484886 RAD54LQ92698 747 aa21.12■□□□□ 0.97
SNX17-206ENST00000484886 PRIMPOLQ96LW4 560 aa21.12■□□□□ 0.97
SNX17-206ENST00000484886 EIF2AQ9BY44 585 aaKnown RBP21.12■□□□□ 0.97
SNX17-206ENST00000484886 MRPL9Q9BYD2 267 aaKnown RBP21.12■□□□□ 0.97
SNX17-206ENST00000484886 CCSER1Q9C0I3 900 aa21.12■□□□□ 0.97
SNX17-206ENST00000484886 LMCD1Q9NZU5 365 aa21.12■□□□□ 0.97
SNX17-206ENST00000484886 KCND2Q9NZV8 630 aa21.12■□□□□ 0.97
SNX17-206ENST00000484886 PRRC2BQ5JSZ5 2229 aaKnown RBP21.12■□□□□ 0.97
SNX17-206ENST00000484886 NPHP3-ACAD11A0A0J9YXS1 232 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 MEIS3P2A8K0S8 358 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 SFI1A8K8P3 1242 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 ZNF623O75123 536 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 NPTXRO95502 500 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 ITGA4P13612 1032 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 LAG3P18627 525 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 CACNB1Q02641 598 aaPredicted RBP21.11■□□□□ 0.97
SNX17-206ENST00000484886 MCM6Q14566 821 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 PPP4R3CPQ6ZMV5 832 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 THNSL1Q8IYQ7 743 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 DAW1Q8N136 415 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 COLGALT1Q8NBJ5 622 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 SLC17A8Q8NDX2 589 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 CNNM3Q8NE01 707 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 URGCPQ8TCY9 931 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 MRPL38Q96DV4 380 aaKnown RBP21.11■□□□□ 0.97
SNX17-206ENST00000484886 APOL6Q9BWW8 343 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 ALG13Q9NP73 1137 aaKnown RBP21.11■□□□□ 0.97
SNX17-206ENST00000484886 KMT5AQ9NQR1 393 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 IPPQ9Y573 584 aa21.11■□□□□ 0.97
SNX17-206ENST00000484886 CNTNAP2Q9UHC6 1331 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 GRM6O15303 877 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 NPTX2P47972 431 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 RNASELQ05823 741 aaKnown RBP21.1■□□□□ 0.97
SNX17-206ENST00000484886 FAM187BQ17R55 369 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 RRAGBQ5VZM2 374 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 SLC27A1Q6PCB7 646 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 HACE1Q8IYU2 909 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 KLHL23Q8NBE8 558 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 LARP4BQ92615 738 aaKnown RBP21.1■□□□□ 0.97
SNX17-206ENST00000484886 P2RX5Q93086 422 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 CCDC113Q9H0I3 377 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 FZD8Q9H461 694 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 CWH43Q9H720 699 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 RSAD1Q9HA92 442 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 BLOC1S4Q9NUP1 217 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 MORC2Q9Y6X9 1032 aaPredicted RBP21.1■□□□□ 0.97
SNX17-206ENST00000484886 MYH11P35749 1972 aa21.1■□□□□ 0.97
SNX17-206ENST00000484886 K7ERI5 159 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 N4BP3O15049 544 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 YEATS4O95619 227 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 NCLP19338 710 aaKnown RBP21.09■□□□□ 0.97
SNX17-206ENST00000484886 MAPK7Q13164 816 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 NAALADL2Q58DX5 795 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 NOMO2Q5JPE7 1267 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 LRRC55Q6ZSA7 311 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 MRPL10Q7Z7H8 261 aaKnown RBP21.09■□□□□ 0.97
SNX17-206ENST00000484886 SMG8Q8ND04 991 aaKnown RBP21.09■□□□□ 0.97
SNX17-206ENST00000484886 LRRC15Q8TF66 581 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 ZNF558Q96NG5 402 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 ADPGKQ9BRR6 497 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 GBP3Q9H0R5 595 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 ZHX3Q9H4I2 956 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 C17orf75Q9HAS0 396 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 PLAGL2Q9UPG8 496 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 HES2Q9Y543 173 aa21.09■□□□□ 0.97
SNX17-206ENST00000484886 PHLPP2Q6ZVD8 1323 aa21.08■□□□□ 0.97
SNX17-206ENST00000484886 COL6A3P12111 3177 aa21.08■□□□□ 0.97
SNX17-206ENST00000484886 A0A1B0GUA9 196 aa21.08■□□□□ 0.97
SNX17-206ENST00000484886 ACKR2O00590 384 aa21.08■□□□□ 0.97
SNX17-206ENST00000484886 TRANK1O15050 2925 aa21.08■□□□□ 0.97
SNX17-206ENST00000484886 SLC16A4O15374 487 aa21.08■□□□□ 0.97
SNX17-206ENST00000484886 PPP6R2O75170 966 aa21.08■□□□□ 0.97
SNX17-206ENST00000484886 OFD1O75665 1012 aa21.08■□□□□ 0.97
SNX17-206ENST00000484886 FAM13AO94988 1023 aa21.08■□□□□ 0.97
SNX17-206ENST00000484886 ITGB1P05556 798 aa21.08■□□□□ 0.97
SNX17-206ENST00000484886 PLS3P13797 630 aa21.08■□□□□ 0.97
SNX17-206ENST00000484886 SMTNP53814 917 aa21.08■□□□□ 0.97
SNX17-206ENST00000484886 CSPP1Q1MSJ5 1256 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms