RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ZC3H11AO75152 810 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCFD1-206ENST00000484733 SRGAP2CP0DJJ0 459 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 XRCC6P12956 609 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCFD1-206ENST00000484733 CTTNQ14247 550 aaKnown RBP12.78□□□□□ -0.36
SCFD1-206ENST00000484733 NECAB1Q8N987 351 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 SLC22A17Q8WUG5 538 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 EIF2AK1Q9BQI3 630 aaKnown RBP12.78□□□□□ -0.36
SCFD1-206ENST00000484733 PCDHA12Q9UN75 941 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 NR2E1Q9Y466 385 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 MEIS3P2A8K0S8 358 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 LARGE1O95461 756 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 MTHFRP42898 656 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 SLC11A1P49279 550 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 PTENP60484 403 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 SIGLEC14Q08ET2 396 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 CES5AQ6NT32 575 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 PPFIBP1Q86W92 1011 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 TMEM173Q86WV6 379 aaPredicted RBP12.78□□□□□ -0.36
SCFD1-206ENST00000484733 RNF149Q8NC42 400 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 RSAD1Q9HA92 442 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 XPNPEP1Q9NQW7 623 aa12.78□□□□□ -0.36
SCFD1-206ENST00000484733 RNASELQ05823 741 aaKnown RBP12.77□□□□□ -0.36
SCFD1-206ENST00000484733 TFDP1Q14186 410 aa12.77□□□□□ -0.36
SCFD1-206ENST00000484733 CALCRLQ16602 461 aa12.77□□□□□ -0.36
SCFD1-206ENST00000484733 PTPN21Q16825 1174 aa12.77□□□□□ -0.36
SCFD1-206ENST00000484733 TPH2Q8IWU9 490 aa12.77□□□□□ -0.36
SCFD1-206ENST00000484733 BCL7CQ8WUZ0 217 aaPredicted RBP12.77□□□□□ -0.36
SCFD1-206ENST00000484733 FBXL18Q96ME1 805 aa12.77□□□□□ -0.36
SCFD1-206ENST00000484733 MTMR9Q96QG7 549 aa12.77□□□□□ -0.36
SCFD1-206ENST00000484733 NFKBIZQ9BYH8 718 aa12.77□□□□□ -0.36
SCFD1-206ENST00000484733 INPP5FQ9Y2H2 1132 aa12.77□□□□□ -0.36
SCFD1-206ENST00000484733 ZBTB39O15060 712 aa12.77□□□□□ -0.37
SCFD1-206ENST00000484733 DGAT1O75907 488 aa12.77□□□□□ -0.37
SCFD1-206ENST00000484733 ALDH2P05091 517 aa12.77□□□□□ -0.37
SCFD1-206ENST00000484733 ARL2P36404 184 aa12.77□□□□□ -0.37
SCFD1-206ENST00000484733 CYP4A11Q02928 519 aa12.77□□□□□ -0.37
SCFD1-206ENST00000484733 ZNF280BQ86YH2 543 aa12.77□□□□□ -0.37
SCFD1-206ENST00000484733 SMG8Q8ND04 991 aaKnown RBP12.77□□□□□ -0.37
SCFD1-206ENST00000484733 RIPOR3Q96MK2 946 aa12.77□□□□□ -0.37
SCFD1-206ENST00000484733 PRRX2Q99811 253 aa12.77□□□□□ -0.37
SCFD1-206ENST00000484733 DNAJB4Q9UDY4 337 aa12.77□□□□□ -0.37
SCFD1-206ENST00000484733 TECTAO75443 2155 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.76□□□□□ -0.37
SCFD1-206ENST00000484733 BTBD18B2RXH4 712 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 B4GALT3O60512 393 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 TSPAN1O60635 241 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 LILRB3O75022 631 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 DDHD2O94830 711 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 LONRF3Q496Y0 759 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 DIS3L2Q8IYB7 885 aaKnown RBP12.76□□□□□ -0.37
SCFD1-206ENST00000484733 PBXIP1Q96AQ6 731 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 VN1R3Q9BXE9 311 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 TTC12Q9H892 705 aaPredicted RBP12.76□□□□□ -0.37
SCFD1-206ENST00000484733 FAN1Q9Y2M0 1017 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 ZMYM2Q9UBW7 1377 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 NEMFO60524 1076 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 DTNBO60941 627 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 ERLIN2O94905 339 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 ITGA4P13612 1032 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 NCBP1Q09161 790 aaKnown RBP12.76□□□□□ -0.37
SCFD1-206ENST00000484733 TRIM29Q14134 588 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 PTPN14Q15678 1187 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 KIAA1841Q6NSI8 718 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 NOTUMQ6P988 496 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 ASIC4Q96FT7 647 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 FAM193BQ96PV7 902 aaPredicted RBP12.76□□□□□ -0.37
SCFD1-206ENST00000484733 APOL5Q9BWW9 433 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 CSRNP2Q9H175 543 aa12.76□□□□□ -0.37
SCFD1-206ENST00000484733 NRP1O14786 923 aa12.75□□□□□ -0.37
SCFD1-206ENST00000484733 RARRES1P49788 294 aa12.75□□□□□ -0.37
SCFD1-206ENST00000484733 NEK4P51957 841 aa12.75□□□□□ -0.37
SCFD1-206ENST00000484733 NHLH1Q02575 133 aa12.75□□□□□ -0.37
SCFD1-206ENST00000484733 AMHR2Q16671 573 aa12.75□□□□□ -0.37
SCFD1-206ENST00000484733 ZDHHC14Q8IZN3 488 aa12.75□□□□□ -0.37
SCFD1-206ENST00000484733 FBXL6Q8N531 539 aa12.75□□□□□ -0.37
SCFD1-206ENST00000484733 KLHL5Q96PQ7 755 aa12.75□□□□□ -0.37
SCFD1-206ENST00000484733 EMILIN2Q9BXX0 1053 aa12.75□□□□□ -0.37
SCFD1-206ENST00000484733 GBP3Q9H0R5 595 aa12.75□□□□□ -0.37
SCFD1-206ENST00000484733 POMKQ9H5K3 350 aa12.75□□□□□ -0.37
SCFD1-206ENST00000484733 SSX2IPQ9Y2D8 614 aa12.75□□□□□ -0.37
SCFD1-206ENST00000484733 IPPQ9Y573 584 aa12.75□□□□□ -0.37
SCFD1-206ENST00000484733 JAK2O60674 1132 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 EFEMP2O95967 443 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 MBTD1Q05BQ5 628 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 ORC2Q13416 577 aaPredicted RBP12.74□□□□□ -0.37
SCFD1-206ENST00000484733 CAPSQ13938 189 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 TMEM87AQ8NBN3 555 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 ASAP3Q8TDY4 903 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 AUTS2Q8WXX7 1259 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 HERC2P3Q9BVR0 1158 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 BMP2KQ9NSY1 1161 aaPredicted RBP12.74□□□□□ -0.37
SCFD1-206ENST00000484733 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
SCFD1-206ENST00000484733 USTQ9Y2C2 406 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 GIT1Q9Y2X7 761 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 WNT7AO00755 349 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 C1RP00736 705 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 EPCAMP16422 314 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 CA8P35219 290 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 TXKP42681 527 aa12.74□□□□□ -0.37
SCFD1-206ENST00000484733 AFF1P51825 1210 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms