RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 TKFCQ3LXA3 575 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 CCDC144BQ3MJ40 725 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 DCAF17Q5H9S7 520 aaPredicted RBP6.49□□□□□ -1.37
SCAF11-207ENST00000484275 KIF18BQ86Y91 864 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 DNAJC10Q8IXB1 793 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 UNC5BQ8IZJ1 945 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 GPR150Q8NGU9 434 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 RNPC3Q96LT9 517 aaKnown RBP6.49□□□□□ -1.37
SCAF11-207ENST00000484275 IFT57Q9NWB7 429 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 PCDHB6Q9Y5E3 794 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 MAFGO15525 162 aa6.48□□□□□ -1.37
SCAF11-207ENST00000484275 GAS7O60861 476 aa6.48□□□□□ -1.37
SCAF11-207ENST00000484275 NEK4P51957 841 aa6.48□□□□□ -1.37
SCAF11-207ENST00000484275 KRTAP1-1Q07627 177 aa6.48□□□□□ -1.37
SCAF11-207ENST00000484275 PCBP1Q15365 356 aaKnown RBP eCLIP6.48□□□□□ -1.37
SCAF11-207ENST00000484275 MSL3Q8N5Y2 521 aaKnown RBP6.48□□□□□ -1.37
SCAF11-207ENST00000484275 LSM14BQ9BX40 385 aaKnown RBP6.48□□□□□ -1.37
SCAF11-207ENST00000484275 ZNF768Q9H5H4 540 aaKnown RBP6.48□□□□□ -1.37
SCAF11-207ENST00000484275 MSRAQ9UJ68 235 aa6.48□□□□□ -1.37
SCAF11-207ENST00000484275 FZD1Q9UP38 647 aa6.48□□□□□ -1.37
SCAF11-207ENST00000484275 SORCS3Q9UPU3 1222 aa6.48□□□□□ -1.37
SCAF11-207ENST00000484275 TMEM191CA6NGB0 347 aa6.47□□□□□ -1.37
SCAF11-207ENST00000484275 SEC24DO94855 1032 aaPredicted RBP6.47□□□□□ -1.37
SCAF11-207ENST00000484275 LRRTM3Q86VH5 581 aa6.47□□□□□ -1.37
SCAF11-207ENST00000484275 CDYL2Q8N8U2 506 aa6.47□□□□□ -1.37
SCAF11-207ENST00000484275 OR52N2Q8NGI0 321 aa6.47□□□□□ -1.37
SCAF11-207ENST00000484275 CPT1CQ8TCG5 803 aa6.47□□□□□ -1.37
SCAF11-207ENST00000484275 USP18Q9UMW8 372 aa6.47□□□□□ -1.37
SCAF11-207ENST00000484275 HS3ST4Q9Y661 456 aa6.47□□□□□ -1.37
SCAF11-207ENST00000484275 ITGB1P05556 798 aa6.46□□□□□ -1.38
SCAF11-207ENST00000484275 SEPT7Q16181 437 aaKnown RBP6.46□□□□□ -1.38
SCAF11-207ENST00000484275 ESPNLQ6ZVH7 1005 aa6.46□□□□□ -1.38
SCAF11-207ENST00000484275 SYNPOQ8N3V7 929 aa6.46□□□□□ -1.38
SCAF11-207ENST00000484275 SMC1BQ8NDV3 1235 aa6.46□□□□□ -1.38
SCAF11-207ENST00000484275 OR5M3Q8NGP4 307 aa6.46□□□□□ -1.38
SCAF11-207ENST00000484275 PROKR1Q8TCW9 393 aa6.46□□□□□ -1.38
SCAF11-207ENST00000484275 CPPED1Q9BRF8 314 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-207ENST00000484275 PRSS38A1L453 326 aa6.45□□□□□ -1.38
SCAF11-207ENST00000484275 AHRRA9YTQ3 701 aa6.45□□□□□ -1.38
SCAF11-207ENST00000484275 NRP1O14786 923 aa6.45□□□□□ -1.38
SCAF11-207ENST00000484275 SCAF4O95104 1147 aaKnown RBP6.45□□□□□ -1.38
SCAF11-207ENST00000484275 GCP02774 474 aa6.45□□□□□ -1.38
SCAF11-207ENST00000484275 FAM189BP81408 668 aa6.45□□□□□ -1.38
SCAF11-207ENST00000484275 MRPL49Q13405 166 aaKnown RBP6.45□□□□□ -1.38
SCAF11-207ENST00000484275 TCEA2Q15560 299 aa6.45□□□□□ -1.38
SCAF11-207ENST00000484275 CSRP2Q16527 193 aa6.45□□□□□ -1.38
SCAF11-207ENST00000484275 CNNM4Q6P4Q7 775 aa6.45□□□□□ -1.38
SCAF11-207ENST00000484275 LRRC55Q6ZSA7 311 aa6.45□□□□□ -1.38
SCAF11-207ENST00000484275 LYSMD2Q8IV50 215 aa6.45□□□□□ -1.38
SCAF11-207ENST00000484275 CRAMP1Q96RY5 1269 aa6.45□□□□□ -1.38
SCAF11-207ENST00000484275 SPTLC3Q9NUV7 552 aa6.45□□□□□ -1.38
SCAF11-207ENST00000484275 USP36Q9P275 1121 aaKnown RBP6.45□□□□□ -1.38
SCAF11-207ENST00000484275 TMPRSS11EQ9UL52 423 aa6.45□□□□□ -1.38
SCAF11-207ENST00000484275 A0A1W2PR48 441 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 GRID2IPA4D2P6 1211 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 DNAJC6O75061 913 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 BMP5P22003 454 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 ADRA1BP35368 520 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 VPS72Q15906 364 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 GPR158Q5T848 1215 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 TAS1R1Q7RTX1 841 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 XYLT1Q86Y38 959 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 SYNE4Q8N205 404 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 GAB3Q8WWW8 586 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 NINJ1Q92982 152 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 FERMT2Q96AC1 680 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 GPR101Q96P66 508 aaPredicted RBP6.44□□□□□ -1.38
SCAF11-207ENST00000484275 PDCD2LQ9BRP1 358 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 KCNH6Q9H252 994 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 PRDM12Q9H4Q4 367 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.44□□□□□ -1.38
SCAF11-207ENST00000484275 PPP2R3BQ9Y5P8 575 aa6.44□□□□□ -1.38
SCAF11-207ENST00000484275 ST20-MTHFSA0A0A6YYL1 179 aa6.43□□□□□ -1.38
SCAF11-207ENST00000484275 TRIM24O15164 1050 aa6.43□□□□□ -1.38
SCAF11-207ENST00000484275 APOBEC3AP31941 199 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-207ENST00000484275 KPNA1P52294 538 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-207ENST00000484275 PASD1Q8IV76 773 aa6.43□□□□□ -1.38
SCAF11-207ENST00000484275 LILRA3Q8N6C8 439 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-207ENST00000484275 IL17RAQ96F46 866 aa6.43□□□□□ -1.38
SCAF11-207ENST00000484275 TARS2Q9BW92 718 aaKnown RBP6.43□□□□□ -1.38
SCAF11-207ENST00000484275 EPC1Q9H2F5 836 aa6.43□□□□□ -1.38
SCAF11-207ENST00000484275 CENPVL1A0A0U1RR11 272 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 LPXNO60711 386 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 ABHD16AO95870 558 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 PHC1P78364 1004 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 MGAT5Q09328 741 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 TERF2Q15554 542 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 PLEKHG4Q58EX7 1191 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 METTL24Q5JXM2 366 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 LY6G5CQ5SRR4 150 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 KCNV1Q6PIU1 500 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 C16orf86Q6ZW13 317 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 FAM83AQ86UY5 434 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 HOMER1Q86YM7 354 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 SLC41A1Q8IVJ1 513 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 DHX37Q8IY37 1157 aaKnown RBP6.42□□□□□ -1.38
SCAF11-207ENST00000484275 ZNF610Q8N9Z0 462 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 FANCLQ9NW38 375 aa6.42□□□□□ -1.38
SCAF11-207ENST00000484275 EVLQ9UI08 416 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-207ENST00000484275 LEFTY2O00292 366 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms