RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TTC12Q9H892 705 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-213ENST00000484112 EVPLQ92817 2033 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.15□□□□□ -0.62
CPSF4-213ENST00000484112 SPDYE4A6NLX3 237 aa11.15□□□□□ -0.62
CPSF4-213ENST00000484112 CSDE1O75534 798 aaKnown RBP11.15□□□□□ -0.62
CPSF4-213ENST00000484112 OR52Z1P0C646 297 aa11.15□□□□□ -0.62
CPSF4-213ENST00000484112 MUTP22033 750 aa11.15□□□□□ -0.62
CPSF4-213ENST00000484112 PRPHP41219 470 aa11.15□□□□□ -0.62
CPSF4-213ENST00000484112 BCAR1P56945 870 aa11.15□□□□□ -0.62
CPSF4-213ENST00000484112 PRKCEQ02156 737 aa11.15□□□□□ -0.62
CPSF4-213ENST00000484112 C4orf19Q8IY42 314 aa11.15□□□□□ -0.62
CPSF4-213ENST00000484112 VPS52Q8N1B4 723 aa11.15□□□□□ -0.62
CPSF4-213ENST00000484112 FLCNQ8NFG4 579 aa11.15□□□□□ -0.62
CPSF4-213ENST00000484112 TMEM169Q96HH4 297 aa11.15□□□□□ -0.62
CPSF4-213ENST00000484112 RAB34Q9BZG1 259 aa11.15□□□□□ -0.62
CPSF4-213ENST00000484112 ZSWIM4Q9H7M6 989 aa11.15□□□□□ -0.62
CPSF4-213ENST00000484112 MYH9P35579 1960 aaKnown RBP11.15□□□□□ -0.62
CPSF4-213ENST00000484112 A0A0U1RQF3 1178 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 ZNF862O60290 1169 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 ZC3H11AO75152 810 aaKnown RBP eCLIP11.14□□□□□ -0.63
CPSF4-213ENST00000484112 LYPLA2O95372 231 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 EOMESO95936 686 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 BMP15O95972 392 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 XRCC6P12956 609 aaKnown RBP eCLIP11.14□□□□□ -0.63
CPSF4-213ENST00000484112 DARSP14868 501 aaKnown RBP11.14□□□□□ -0.63
CPSF4-213ENST00000484112 EPCAMP16422 314 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 MCM7P33993 719 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 TXKP42681 527 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 FXR2P51116 673 aaKnown RBP eCLIP11.14□□□□□ -0.63
CPSF4-213ENST00000484112 GPC3P51654 580 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 PDIA5Q14554 519 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 TARBP2Q15633 366 aaKnown RBP11.14□□□□□ -0.63
CPSF4-213ENST00000484112 MCTP1Q6DN14 999 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 ASTLQ6HA08 431 aaPredicted RBP11.14□□□□□ -0.63
CPSF4-213ENST00000484112 TMC5Q6UXY8 1006 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 OTUD6AQ7L8S5 288 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 KCTD17Q8N5Z5 321 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 ERMNQ8TAM6 284 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 HSD17B14Q9BPX1 270 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 MRPL9Q9BYD2 267 aaKnown RBP11.14□□□□□ -0.63
CPSF4-213ENST00000484112 DACT1Q9NYF0 836 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 ZDBF2Q9HCK1 2354 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 WDFY4Q6ZS81 3184 aa11.14□□□□□ -0.63
CPSF4-213ENST00000484112 PRR23AA6NEV1 266 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 PROB1E7EW31 1015 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 EML1O00423 815 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 GAS2O43903 313 aaKnown RBP11.13□□□□□ -0.63
CPSF4-213ENST00000484112 TOB1P50616 345 aaPredicted RBP11.13□□□□□ -0.63
CPSF4-213ENST00000484112 TBC1D8BQ0IIM8 1120 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 ARL6IP4Q66PJ3 421 aaKnown RBP11.13□□□□□ -0.63
CPSF4-213ENST00000484112 HAUS3Q68CZ6 603 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 NCAPH2Q6IBW4 605 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 KIAA1841Q6NSI8 718 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 FRMD5Q7Z6J6 570 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 ZNF598Q86UK7 904 aaKnown RBP11.13□□□□□ -0.63
CPSF4-213ENST00000484112 CABP7Q86V35 215 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 TMEM173Q86WV6 379 aaPredicted RBP11.13□□□□□ -0.63
CPSF4-213ENST00000484112 ZDHHC14Q8IZN3 488 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 LINC01465Q8N7H1 131 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 FEZF2Q8TBJ5 459 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 LPPQ93052 612 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 NKD2Q969F2 451 aaPredicted RBP11.13□□□□□ -0.63
CPSF4-213ENST00000484112 GJA10Q969M2 543 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 GBP3Q9H0R5 595 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 ZBP1Q9H171 429 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 TUFT1Q9NNX1 390 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.13□□□□□ -0.63
CPSF4-213ENST00000484112 DZANK1Q9NVP4 752 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 INPP5FQ9Y2H2 1132 aa11.13□□□□□ -0.63
CPSF4-213ENST00000484112 WDR81Q562E7 1941 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 IGKV6-21A0A0C4DH24 114 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 WNT7AO00755 349 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 SLITRK3O94933 977 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 STBD1O95210 358 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 SSBP05455 408 aaKnown RBP eCLIP11.12□□□□□ -0.63
CPSF4-213ENST00000484112 ATP2B1P20020 1258 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 SYT1P21579 422 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 YWHABP31946 246 aaKnown RBP11.12□□□□□ -0.63
CPSF4-213ENST00000484112 RFC5P40937 340 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 NBL1P41271 181 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 DNM2P50570 870 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 RNASELQ05823 741 aaKnown RBP11.12□□□□□ -0.63
CPSF4-213ENST00000484112 DRP2Q13474 957 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 ZNF174Q15697 407 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 UGCGQ16739 394 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 MTERF2Q49AM1 385 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 TWF2Q6IBS0 349 aaKnown RBP11.12□□□□□ -0.63
CPSF4-213ENST00000484112 C4orf32Q8N8J7 132 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 ACSF2Q96CM8 615 aaPredicted RBP11.12□□□□□ -0.63
CPSF4-213ENST00000484112 EIF2AK1Q9BQI3 630 aaKnown RBP11.12□□□□□ -0.63
CPSF4-213ENST00000484112 SH2D3AQ9BRG2 576 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 LXNQ9BS40 222 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 POLR3CQ9BUI4 534 aaPredicted RBP11.12□□□□□ -0.63
CPSF4-213ENST00000484112 GCOM2Q9BZD3 368 aaPredicted RBP11.12□□□□□ -0.63
CPSF4-213ENST00000484112 TMEM60Q9H2L4 133 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 ZSCAN16Q9H4T2 348 aaPredicted RBP11.12□□□□□ -0.63
CPSF4-213ENST00000484112 CYP26B1Q9NR63 512 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 ANKEF1Q9NU02 776 aa11.12□□□□□ -0.63
CPSF4-213ENST00000484112 SEPT9Q9UHD8 586 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms