RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 NFRKBQ6P4R8 1299 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 NME8Q8N427 588 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 TMEM161BQ8NDZ6 487 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 TMEM174Q8WUU8 243 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 PRPF31Q8WWY3 499 aaKnown RBP15.33■□□□□ 0.04
SMAD9-204ENST00000483941 LENG1Q96BZ8 264 aaPredicted RBP15.33■□□□□ 0.04
SMAD9-204ENST00000483941 FIZ1Q96SL8 496 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 STRA6Q9BX79 667 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 NFKBIZQ9BYH8 718 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 ARHGAP28Q9P2N2 729 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 TBX20Q9UMR3 447 aa15.33■□□□□ 0.04
SMAD9-204ENST00000483941 SMIM35A0A1B0GVV1 85 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 DENND3A2RUS2 1198 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 LRRIQ4A6NIV6 560 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 K7ERI5 159 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 KIAA0391O15091 583 aaKnown RBP15.32■□□□□ 0.04
SMAD9-204ENST00000483941 SLC16A4O15374 487 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 SERPINC1P01008 464 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 RAG1P15918 1043 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 PTGS1P23219 599 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 PHKA2P46019 1235 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 FPGSQ05932 587 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 LAMTOR4Q0VGL1 99 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 PCBP1Q15365 356 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMAD9-204ENST00000483941 KCNA10Q16322 511 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 TAF2Q6P1X5 1199 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 FILIP1Q7Z7B0 1213 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 RSPH3Q86UC2 560 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 SESTD1Q86VW0 696 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 NELFCDQ8IXH7 590 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 GLT1D1Q96MS3 346 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 SRRTQ9BXP5 876 aaKnown RBP15.32■□□□□ 0.04
SMAD9-204ENST00000483941 TRIM5Q9C035 493 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 KCTD10Q9H3F6 313 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 PHF24Q9UPV7 400 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 AKT3Q9Y243 479 aa15.32■□□□□ 0.04
SMAD9-204ENST00000483941 WDR81Q562E7 1941 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 MBLAC1A4D2B0 266 aaPredicted RBP15.31■□□□□ 0.04
SMAD9-204ENST00000483941 KIAA0355O15063 1070 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 ASGR1P07306 291 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 ZNF18P17022 549 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 PLA2G5P39877 138 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 CASP5P51878 434 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 CHMP4BP1P59074 171 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 ADAM9Q13443 819 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 CDKAL1Q5VV42 579 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 SLFN12LQ6IEE8 588 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 ZNF410Q86VK4 478 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 RHPN2Q8IUC4 686 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 MAP4K3Q8IVH8 894 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 C12orf56Q8IXR9 622 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 ASAP3Q8TDY4 903 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 LMBR1Q8WVP7 490 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 TIFAQ96CG3 184 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 INO80BQ9C086 356 aaPredicted RBP15.31■□□□□ 0.04
SMAD9-204ENST00000483941 ZNF576Q9H609 170 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 METTL14Q9HCE5 456 aaKnown RBP15.31■□□□□ 0.04
SMAD9-204ENST00000483941 POLD4Q9HCU8 107 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 SETD4Q9NVD3 440 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 FRMD4BQ9Y2L6 1034 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 MYO9BQ13459 2157 aa15.31■□□□□ 0.04
SMAD9-204ENST00000483941 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.3■□□□□ 0.04
SMAD9-204ENST00000483941 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.3■□□□□ 0.04
SMAD9-204ENST00000483941 SLC16A3O15427 465 aaKnown RBP15.3■□□□□ 0.04
SMAD9-204ENST00000483941 PQBP1O60828 265 aaKnown RBP15.3■□□□□ 0.04
SMAD9-204ENST00000483941 PPP2R3AQ06190 1150 aa15.3■□□□□ 0.04
SMAD9-204ENST00000483941 NCBP1Q09161 790 aaKnown RBP15.3■□□□□ 0.04
SMAD9-204ENST00000483941 MAPK6Q16659 721 aa15.3■□□□□ 0.04
SMAD9-204ENST00000483941 ZCWPW2Q504Y3 356 aa15.3■□□□□ 0.04
SMAD9-204ENST00000483941 ZC2HC1CQ53FD0 456 aaPredicted RBP15.3■□□□□ 0.04
SMAD9-204ENST00000483941 CDCA2Q69YH5 1023 aaPredicted RBP15.3■□□□□ 0.04
SMAD9-204ENST00000483941 CCSAPQ6IQ19 270 aaPredicted RBP15.3■□□□□ 0.04
SMAD9-204ENST00000483941 CXCL17Q6UXB2 119 aa15.3■□□□□ 0.04
SMAD9-204ENST00000483941 SLC9A9Q8IVB4 645 aa15.3■□□□□ 0.04
SMAD9-204ENST00000483941 LRRC71Q8N4P6 559 aa15.3■□□□□ 0.04
SMAD9-204ENST00000483941 LINC01465Q8N7H1 131 aa15.3■□□□□ 0.04
SMAD9-204ENST00000483941 RNF149Q8NC42 400 aa15.3■□□□□ 0.04
SMAD9-204ENST00000483941 GBF1Q92538 1859 aa15.3■□□□□ 0.04
SMAD9-204ENST00000483941 VTI1AQ96AJ9 217 aa15.3■□□□□ 0.04
SMAD9-204ENST00000483941 BICD1Q96G01 975 aa15.3■□□□□ 0.04
SMAD9-204ENST00000483941 GAS2L1Q99501 681 aaPredicted RBP15.3■□□□□ 0.04
SMAD9-204ENST00000483941 DUSP9Q99956 384 aaKnown RBP15.3■□□□□ 0.04
SMAD9-204ENST00000483941 THEGQ9P2T0 379 aa15.3■□□□□ 0.04
SMAD9-204ENST00000483941 A0A1W2PQ45 241 aaPredicted RBP15.29■□□□□ 0.04
SMAD9-204ENST00000483941 A0A1W2PQY0 241 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 TRIM49BA6NDI0 452 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 MYADML2A6NDP7 307 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 LRRC10BA6NIK2 292 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 GOLGA6L6A8MZA4 724 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 KCNJ18B7U540 433 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 NR3C1P04150 777 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 SRGAP2CP0DJJ0 459 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 EPB41P11171 864 aaKnown RBP15.29■□□□□ 0.04
SMAD9-204ENST00000483941 CYP2C9P11712 490 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 NR2F2P24468 414 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 HOXC8P31273 242 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 ACLYP53396 1101 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 PMS1P54277 932 aaKnown RBP15.29■□□□□ 0.04
SMAD9-204ENST00000483941 UBASH3AP57075 661 aa15.29■□□□□ 0.04
SMAD9-204ENST00000483941 PTENP60484 403 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms