RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 GPR88Q9GZN0 384 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 PDCL3Q9H2J4 239 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 ADAMTS1Q9UHI8 967 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 DNAJC12Q9UKB3 198 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 ASB14A6NK59 587 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 GFPT2O94808 682 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 PIGRP01833 764 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 ATP1A1P05023 1023 aaKnown RBP14.4□□□□□ -0.1
CPNE1-225ENST00000483495 GLRA2P23416 452 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 TUBB4BP68371 445 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 CCNA1P78396 465 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 CBWD2Q8IUF1 395 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 TMC2Q8TDI7 906 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 ASAP3Q8TDY4 903 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 VTI1AQ96AJ9 217 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 EFCC1Q9HA90 598 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 JRKLQ9Y4A0 524 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 STYXL1Q9Y6J8 313 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 CAPN6Q9Y6Q1 641 aa14.4□□□□□ -0.1
CPNE1-225ENST00000483495 MYH9P35579 1960 aaKnown RBP14.39□□□□□ -0.11
CPNE1-225ENST00000483495 SRCAPQ6ZRS2 3230 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 BTNL10A8MVZ5 291 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 BTBD19C9JJ37 291 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 PDHXO00330 501 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 DRAP1Q14919 205 aaPredicted RBP14.39□□□□□ -0.11
CPNE1-225ENST00000483495 PHLDB3Q6NSJ2 640 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 PLPPR4Q7Z2D5 763 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 ANKRD23Q86SG2 305 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 PARD3BQ8TEW8 1205 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 RABGGTAQ92696 567 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 GOLGA1Q92805 767 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 TMEM143Q96AN5 459 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.39□□□□□ -0.11
CPNE1-225ENST00000483495 TMEM117Q9H0C3 514 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 ZNF408Q9H9D4 720 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 MORF4L1Q9UBU8 362 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 SALL4Q9UJQ4 1053 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 SAR1BQ9Y6B6 198 aa14.39□□□□□ -0.11
CPNE1-225ENST00000483495 GOLGA8IPA6NC78 632 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 GOLGA8JA6NMD2 632 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 ENC1O14682 589 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 HNRNPDLO14979 420 aaKnown RBP14.38□□□□□ -0.11
CPNE1-225ENST00000483495 KIAA0391O15091 583 aaKnown RBP14.38□□□□□ -0.11
CPNE1-225ENST00000483495 MAFO75444 373 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-225ENST00000483495 H2AFXP16104 143 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-225ENST00000483495 GTF2H1P32780 548 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 GCLMP48507 274 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 CHMP4BP1P59074 171 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 NAB2Q15742 525 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 HSDL1Q3SXM5 330 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 FBXO16Q8IX29 292 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-225ENST00000483495 ABRAQ8N0Z2 381 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 OLIG1Q8TAK6 271 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 BRI3BPQ8WY22 251 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 BBXQ8WY36 941 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-225ENST00000483495 POMGNT1Q8WZA1 660 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 SAAL1Q96ER3 474 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 ALS2CR12Q96Q35 445 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 SYT11Q9BT88 431 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 AZI2Q9H6S1 392 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 GBA2Q9HCG7 927 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-225ENST00000483495 NAGPAQ9UK23 515 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 COQ4Q9Y3A0 265 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 CCL15-CCL14A0A0B4J2E2 113 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 EVI5O60447 810 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 MOCS3O95396 460 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 CCDC172P0C7W6 258 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 PRLRP16471 622 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 GCLCP48506 637 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-225ENST00000483495 MXI1P50539 228 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 CYP24A1Q07973 514 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 BMS1Q14692 1282 aaKnown RBP14.38□□□□□ -0.11
CPNE1-225ENST00000483495 ENOX2Q16206 610 aaKnown RBP14.38□□□□□ -0.11
CPNE1-225ENST00000483495 CCL15Q16663 113 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 ZNF792Q3KQV3 632 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 WDR78Q5VTH9 848 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 VPS36Q86VN1 386 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 GPD1LQ8N335 351 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 GPR161Q8N6U8 529 aaKnown RBP14.38□□□□□ -0.11
CPNE1-225ENST00000483495 NOX5Q96PH1 765 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 TMEM134Q9H6X4 195 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 KIAA1586Q9HCI6 787 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 HDAC6Q9UBN7 1215 aa14.38□□□□□ -0.11
CPNE1-225ENST00000483495 DIS3Q9Y2L1 958 aaKnown RBP14.38□□□□□ -0.11
CPNE1-225ENST00000483495 LRRIQ3A6PVS8 624 aaPredicted RBP14.37□□□□□ -0.11
CPNE1-225ENST00000483495 GAS2O43903 313 aaKnown RBP14.37□□□□□ -0.11
CPNE1-225ENST00000483495 SLC26A2P50443 739 aa14.37□□□□□ -0.11
CPNE1-225ENST00000483495 FBXO38Q6PIJ6 1188 aa14.37□□□□□ -0.11
CPNE1-225ENST00000483495 USP37Q86T82 979 aa14.37□□□□□ -0.11
CPNE1-225ENST00000483495 EXOC8Q8IYI6 725 aa14.37□□□□□ -0.11
CPNE1-225ENST00000483495 SLC30A5Q8TAD4 765 aa14.37□□□□□ -0.11
CPNE1-225ENST00000483495 DEPTORQ8TB45 409 aa14.37□□□□□ -0.11
CPNE1-225ENST00000483495 ATP8B4Q8TF62 1192 aa14.37□□□□□ -0.11
CPNE1-225ENST00000483495 TMEM8AQ9HCN3 771 aa14.37□□□□□ -0.11
CPNE1-225ENST00000483495 IGKV6-21A0A0C4DH24 114 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 ZBTB42B2RXF5 422 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 NOP56O00567 594 aaKnown RBP14.36□□□□□ -0.11
CPNE1-225ENST00000483495 DDX3XO00571 662 aaKnown RBP eCLIP14.36□□□□□ -0.11
CPNE1-225ENST00000483495 STRNO43815 780 aa14.36□□□□□ -0.11
CPNE1-225ENST00000483495 EXTL3O43909 919 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms