RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-229	ENST00000483159	PPP6R2	O75170	966 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	YEATS4	O95619	227 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	SSB	P05455	408 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	ARF4	P18085	180 aa	Predicted RBP	13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	LAG3	P18627	525 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	NCL	P19338	710 aa	Known RBP	13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	DDIT3	P35638	169 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	TXLNA	P40222	546 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	STK38	Q15208	465 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	SLC27A1	Q6PCB7	646 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	GLB1L	Q6UWU2	654 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	DAW1	Q8N136	415 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	LRRC43	Q8N309	656 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	SPRYD3	Q8NCJ5	442 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	RASSF8	Q8NHQ8	419 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	EPSTI1	Q96J88	318 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	CCDC113	Q9H0I3	377 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	KANSL3	Q9P2N6	904 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	TFIP11	Q9UBB9	837 aa	Known RBP	13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	PLAGL2	Q9UPG8	496 aa		13.65	□□□□□ -0.22
MRPL55-229	ENST00000483159	ARID2	Q68CP9	1835 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159		K7ERI5	159 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	SPTLC2	O15270	562 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	OFD1	O75665	1012 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	PLCG1	P19174	1290 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	SCP2	P22307	547 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	NPTX2	P47972	431 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	PEX3	P56589	373 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	MAPK7	Q13164	816 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	DMP1	Q13316	513 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	PRPF4B	Q13523	1007 aa	Known RBP	13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	KARS	Q15046	597 aa	Known RBP	13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	CCDC85B	Q15834	202 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	ARSH	Q5FYA8	562 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	SPOUT1	Q5T280	376 aa	Known RBP	13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	LRRC55	Q6ZSA7	311 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	HACE1	Q8IYU2	909 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	HELQ	Q8TDG4	1101 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	SPIRE2	Q8WWL2	714 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	RAD54L	Q92698	747 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	TMEM134	Q9H6X4	195 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	CWH43	Q9H720	699 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	BLOC1S4	Q9NUP1	217 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	STK17A	Q9UEE5	414 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	CFAP45	Q9UL16	551 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	ODF2L	Q9ULJ1	636 aa		13.64	□□□□□ -0.23
MRPL55-229	ENST00000483159	LOXHD1	Q8IVV2	1947 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	CCDC169	A6NNP5	214 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	N4BP3	O15049	544 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	B4GALT5	O43286	388 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	PRKCB	P05771	671 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	ITGA4	P13612	1032 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	PLS3	P13797	630 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	SMTN	P53814	917 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	UBE3A	Q05086	875 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	NOMO2	Q5JPE7	1267 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	AGMO	Q6ZNB7	445 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	USP49	Q70CQ1	688 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	KLHL23	Q8NBE8	558 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	COLGALT1	Q8NBJ5	622 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	SMG8	Q8ND04	991 aa	Known RBP	13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	SLC17A8	Q8NDX2	589 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	SPPL3	Q8TCT6	385 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	PPM1E	Q8WY54	764 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	SYMPK	Q92797	1274 aa	Known RBP	13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	LPP	Q93052	612 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	CPB2	Q96IY4	423 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	CLIC6	Q96NY7	704 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	TRIM6	Q9C030	488 aa	Predicted RBP	13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	RSAD1	Q9HA92	442 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	POLD4	Q9HCU8	107 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	KMT5A	Q9NQR1	393 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	LARS	Q9P2J5	1176 aa	Known RBP	13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159	IPP	Q9Y573	584 aa		13.63	□□□□□ -0.23
MRPL55-229	ENST00000483159		H0YCG3	227 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	GRM6	O15303	877 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	INPPL1	O15357	1258 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	CUTA	O60888	179 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	ITGB1	P05556	798 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	PPM1A	P35813	382 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	ALDH7A1	P49419	539 aa	Known RBP	13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	PLCB3	Q01970	1234 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	PKP1	Q13835	747 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	TIGD5	Q53EQ6	642 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	SPECC1	Q5M775	1068 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	RRAGB	Q5VZM2	374 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	KCNT2	Q6UVM3	1135 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	CCDC73	Q6ZRK6	1079 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	GPBP1	Q86WP2	473 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	MICALL1	Q8N3F8	863 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	URGCP	Q8TCY9	931 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	KCNG4	Q8TDN1	519 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	LARP4B	Q92615	738 aa	Known RBP	13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	KCNN1	Q92952	543 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	ZNF558	Q96NG5	402 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	ADPGK	Q9BRR6	497 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	EIF2A	Q9BY44	585 aa	Known RBP	13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms