RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 ASAP2O43150 1006 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 NEMFO60524 1076 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 CSDE1O75534 798 aaKnown RBP14.28□□□□□ -0.12
COL21A1-209ENST00000482933 FGF18O76093 207 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 IRS1P35568 1242 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 PPM1AP35813 382 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 LTBRP36941 435 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 PLCB3Q01970 1234 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 CYP4A11Q02928 519 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 ST3GAL1Q11201 340 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 CTTNQ14247 550 aaKnown RBP14.28□□□□□ -0.12
COL21A1-209ENST00000482933 TWF2Q6IBS0 349 aaKnown RBP14.28□□□□□ -0.12
COL21A1-209ENST00000482933 PDE12Q6L8Q7 609 aaKnown RBP14.28□□□□□ -0.12
COL21A1-209ENST00000482933 CATSPER4Q7RTX7 472 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 SRGAP1Q7Z6B7 1085 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 ZNF598Q86UK7 904 aaKnown RBP14.28□□□□□ -0.12
COL21A1-209ENST00000482933 CCDC83Q8IWF9 413 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 TPH2Q8IWU9 490 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 RNF169Q8NCN4 708 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 PSPC1Q8WXF1 523 aaKnown RBP14.28□□□□□ -0.12
COL21A1-209ENST00000482933 TTC12Q9H892 705 aaPredicted RBP14.28□□□□□ -0.12
COL21A1-209ENST00000482933 RNF19AQ9NV58 838 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 PIN4Q9Y237 131 aaKnown RBP14.28□□□□□ -0.12
COL21A1-209ENST00000482933 LZTS1Q9Y250 596 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 MYO7AQ13402 2215 aa14.28□□□□□ -0.12
COL21A1-209ENST00000482933 PLXNA4Q9HCM2 1894 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 SLITRK3O94933 977 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 TXKP42681 527 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 PHKA2P46019 1235 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 NDUFV1P49821 464 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 RAB27AP51159 221 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 HMGN5P82970 282 aaKnown RBP14.27□□□□□ -0.12
COL21A1-209ENST00000482933 KRT17Q04695 432 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 ADAM15Q13444 863 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 XKR9Q5GH70 373 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 KCNT2Q6UVM3 1135 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 LRRC55Q6ZSA7 311 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 KSR1Q8IVT5 923 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 GJD3Q8N144 294 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 EFHBQ8N7U6 833 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 MRPS27Q92552 414 aaKnown RBP14.27□□□□□ -0.12
COL21A1-209ENST00000482933 C8orf76Q96K31 380 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 ZNF558Q96NG5 402 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 EIF2AK1Q9BQI3 630 aaKnown RBP14.27□□□□□ -0.12
COL21A1-209ENST00000482933 TMUB1Q9BVT8 246 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 IFT122Q9HBG6 1241 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 SH2B1Q9NRF2 756 aaPredicted RBP14.27□□□□□ -0.12
COL21A1-209ENST00000482933 PRKAG3Q9UGI9 489 aa14.27□□□□□ -0.12
COL21A1-209ENST00000482933 NCOR1O75376 2440 aa14.27□□□□□ -0.13
COL21A1-209ENST00000482933 CARNS1A5YM72 827 aa14.26□□□□□ -0.13
COL21A1-209ENST00000482933 LYPLA2O95372 231 aa14.26□□□□□ -0.13
COL21A1-209ENST00000482933 SSTR3P32745 418 aaPredicted RBP14.26□□□□□ -0.13
COL21A1-209ENST00000482933 GTF2F1P35269 517 aaKnown RBP eCLIP14.26□□□□□ -0.13
COL21A1-209ENST00000482933 EMC2Q15006 297 aa14.26□□□□□ -0.13
COL21A1-209ENST00000482933 CLLU1OSQ5K130 101 aa14.26□□□□□ -0.13
COL21A1-209ENST00000482933 ADGRD2Q7Z7M1 963 aa14.26□□□□□ -0.13
COL21A1-209ENST00000482933 FAM184AQ8NB25 1140 aa14.26□□□□□ -0.13
COL21A1-209ENST00000482933 HELQQ8TDG4 1101 aa14.26□□□□□ -0.13
COL21A1-209ENST00000482933 TMEM143Q96AN5 459 aa14.26□□□□□ -0.13
COL21A1-209ENST00000482933 MTMR9Q96QG7 549 aa14.26□□□□□ -0.13
COL21A1-209ENST00000482933 CDCA3Q99618 268 aaPredicted RBP14.26□□□□□ -0.13
COL21A1-209ENST00000482933 HSD17B14Q9BPX1 270 aa14.26□□□□□ -0.13
COL21A1-209ENST00000482933 TLE6Q9H808 572 aa14.26□□□□□ -0.13
COL21A1-209ENST00000482933 FAM105AQ9NUU6 356 aa14.26□□□□□ -0.13
COL21A1-209ENST00000482933 CD207Q9UJ71 328 aa14.26□□□□□ -0.13
COL21A1-209ENST00000482933 MBTPS2O43462 519 aa14.25□□□□□ -0.13
COL21A1-209ENST00000482933 ACTN4O43707 911 aaKnown RBP14.25□□□□□ -0.13
COL21A1-209ENST00000482933 ZNF623O75123 536 aa14.25□□□□□ -0.13
COL21A1-209ENST00000482933 TBX10O75333 385 aa14.25□□□□□ -0.13
COL21A1-209ENST00000482933 DGAT1O75907 488 aa14.25□□□□□ -0.13
COL21A1-209ENST00000482933 SRGAP2CP0DJJ0 459 aa14.25□□□□□ -0.13
COL21A1-209ENST00000482933 ATF7P17544 494 aaPredicted RBP14.25□□□□□ -0.13
COL21A1-209ENST00000482933 NRIP1P48552 1158 aa14.25□□□□□ -0.13
COL21A1-209ENST00000482933 DLX2Q07687 328 aaPredicted RBP14.25□□□□□ -0.13
COL21A1-209ENST00000482933 LAMTOR4Q0VGL1 99 aa14.25□□□□□ -0.13
COL21A1-209ENST00000482933 SMAD4Q13485 552 aaKnown RBP14.25□□□□□ -0.13
COL21A1-209ENST00000482933 MXD4Q14582 209 aaPredicted RBP14.25□□□□□ -0.13
COL21A1-209ENST00000482933 PCBP1Q15365 356 aaKnown RBP eCLIP14.25□□□□□ -0.13
COL21A1-209ENST00000482933 SMAD2Q15796 467 aaKnown RBP14.25□□□□□ -0.13
COL21A1-209ENST00000482933 C8orf34Q49A92 452 aa14.25□□□□□ -0.13
COL21A1-209ENST00000482933 RBM23Q86U06 439 aaKnown RBP14.25□□□□□ -0.13
COL21A1-209ENST00000482933 FERMT3Q86UX7 667 aa14.25□□□□□ -0.13
COL21A1-209ENST00000482933 PRPF31Q8WWY3 499 aaKnown RBP14.25□□□□□ -0.13
COL21A1-209ENST00000482933 PGBD4Q96DM1 585 aa14.25□□□□□ -0.13
COL21A1-209ENST00000482933 CCDC43Q96MW1 224 aaKnown RBP14.25□□□□□ -0.13
COL21A1-209ENST00000482933 PRKD2Q9BZL6 878 aa14.25□□□□□ -0.13
COL21A1-209ENST00000482933 FOXP1Q9H334 677 aaPredicted RBP14.25□□□□□ -0.13
COL21A1-209ENST00000482933 NGRNQ9NPE2 291 aaKnown RBP14.25□□□□□ -0.13
COL21A1-209ENST00000482933 ANKEF1Q9NU02 776 aa14.25□□□□□ -0.13
COL21A1-209ENST00000482933 AGPAT5Q9NUQ2 364 aa14.25□□□□□ -0.13
COL21A1-209ENST00000482933 SPG21Q9NZD8 308 aa14.25□□□□□ -0.13
COL21A1-209ENST00000482933 FSCN2O14926 492 aa14.24□□□□□ -0.13
COL21A1-209ENST00000482933 LINC01565O15544 149 aa14.24□□□□□ -0.13
COL21A1-209ENST00000482933 CFHP08603 1231 aa14.24□□□□□ -0.13
COL21A1-209ENST00000482933 XRCC6P12956 609 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL21A1-209ENST00000482933 ATP2B1P20020 1258 aa14.24□□□□□ -0.13
COL21A1-209ENST00000482933 MCM7P33993 719 aa14.24□□□□□ -0.13
COL21A1-209ENST00000482933 ALDH7A1P49419 539 aaKnown RBP14.24□□□□□ -0.13
COL21A1-209ENST00000482933 GUCY1B3Q02153 619 aa14.24□□□□□ -0.13
COL21A1-209ENST00000482933 ORC2Q13416 577 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms