RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 CCDC38Q502W7 563 aa15.41■□□□□ 0.06
COL9A2-207ENST00000482722 DUPD1Q68J44 220 aa15.41■□□□□ 0.06
COL9A2-207ENST00000482722 HHIPL2Q6UWX4 724 aa15.41■□□□□ 0.06
COL9A2-207ENST00000482722 EPS8L3Q8TE67 593 aaKnown RBP15.41■□□□□ 0.06
COL9A2-207ENST00000482722 USP15Q9Y4E8 981 aaPredicted RBP15.41■□□□□ 0.06
COL9A2-207ENST00000482722 IGKV6D-41A0A0C4DH26 115 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 ANKRD33BA6NCL7 494 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 GFPT2O94808 682 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 OAS1P00973 400 aaKnown RBP15.4■□□□□ 0.06
COL9A2-207ENST00000482722 HLA-DOAP06340 250 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 DPEP1P16444 411 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 PON1P27169 355 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 DR1Q01658 176 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 ZYXQ15942 572 aaKnown RBP15.4■□□□□ 0.06
COL9A2-207ENST00000482722 GPATCH4Q5T3I0 446 aaKnown RBP15.4■□□□□ 0.06
COL9A2-207ENST00000482722 STRIP1Q5VSL9 837 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 SIAH1Q8IUQ4 282 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 ERP44Q9BS26 406 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 ANO3Q9BYT9 981 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 SNX24Q9Y343 169 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 PCDHA2Q9Y5H9 948 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 A6NHS1 94 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 H2AFZP0C0S5 128 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 ATP2A2P16615 1042 aaKnown RBP15.4■□□□□ 0.06
COL9A2-207ENST00000482722 MSH2P43246 934 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 ZNF131P52739 623 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 BNIP1Q12981 228 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 LRRC14Q15048 493 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 CNGA2Q16280 664 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 ARSHQ5FYA8 562 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 AADACL2Q6P093 401 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 H2AFVQ71UI9 128 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 FBXO25Q8TCJ0 367 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 HES6Q96HZ4 224 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 ZDHHC15Q96MV8 337 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 FGFR1OP2Q9NVK5 253 aa15.4■□□□□ 0.06
COL9A2-207ENST00000482722 ARMCX3Q9UH62 379 aaPredicted RBP15.4■□□□□ 0.06
COL9A2-207ENST00000482722 SFI1A8K8P3 1242 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 LIN7AO14910 233 aaPredicted RBP15.39■□□□□ 0.05
COL9A2-207ENST00000482722 FLOT1O75955 427 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 GNA14O95837 355 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 PDE6CP51160 858 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 RBM26Q5T8P6 1007 aaKnown RBP15.39■□□□□ 0.05
COL9A2-207ENST00000482722 ZDHHC24Q6UX98 284 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 SFR1Q86XK3 245 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 SEMA4AQ9H3S1 761 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 ERVK-5Q9HDB9 667 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 ARHGEF3Q9NR81 526 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 ETAA1Q9NY74 926 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 PPP1R9AQ9ULJ8 1098 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 DAAM1Q9Y4D1 1078 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 LRRC37AA6NMS7 1700 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 RSPH10B2B2RC85 870 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 DDX3XO00571 662 aaKnown RBP eCLIP15.39■□□□□ 0.052e-6■■■□□ 18.6
COL9A2-207ENST00000482722 AGTP01019 485 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 RSPH10BP0C881 870 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 CASP4P49662 377 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 PTENP60484 403 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 MKRN4PQ13434 485 aaPredicted RBP15.39■□□□□ 0.05
COL9A2-207ENST00000482722 TAF11Q15544 211 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 PPP1R18Q6NYC8 613 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 CATSPER3Q86XQ3 398 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 MGARPQ8TDB4 240 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 OSBPL1AQ9BXW6 950 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 ZFATQ9P243 1243 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 DBR1Q9UK59 544 aaKnown RBP15.39■□□□□ 0.05
COL9A2-207ENST00000482722 RPTORQ8N122 1335 aa15.39■□□□□ 0.05
COL9A2-207ENST00000482722 HGSO14964 777 aaPredicted RBP15.38■□□□□ 0.05
COL9A2-207ENST00000482722 CLIC2O15247 247 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 SNUPNO95149 360 aaKnown RBP15.38■□□□□ 0.05
COL9A2-207ENST00000482722 GH2P01242 217 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 GALCP54803 685 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 DCAF12L1Q5VU92 463 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 LARGE2Q8N3Y3 721 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 DHX36Q9H2U1 1008 aaKnown RBP15.38■□□□□ 0.05
COL9A2-207ENST00000482722 TCP11X1B4DZS4 312 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 HOXA13P31271 388 aaPredicted RBP15.38■□□□□ 0.05
COL9A2-207ENST00000482722 ECE1P42892 770 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 C6orf118Q5T5N4 469 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 DPY19L2P1Q6NXN4 242 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 FOXR2Q6PJQ5 311 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 GLYCTKQ8IVS8 523 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 REEP2Q9BRK0 252 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 PLIN4Q96Q06 1357 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 AKAP3O75969 853 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 AFPP02771 609 aaKnown RBP15.38■□□□□ 0.05
COL9A2-207ENST00000482722 XRCC5P13010 732 aaKnown RBP15.38■□□□□ 0.05
COL9A2-207ENST00000482722 KCNA1Q09470 495 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 RBBP5Q15291 538 aaKnown RBP15.38■□□□□ 0.05
COL9A2-207ENST00000482722 SLFN13Q68D06 897 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 TRIM68Q6AZZ1 485 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 DYDC1Q8WWB3 177 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 CSRNP1Q96S65 589 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 P2RX7Q99572 595 aaKnown RBP15.38■□□□□ 0.05
COL9A2-207ENST00000482722 SEPT11Q9NVA2 429 aaKnown RBP15.38■□□□□ 0.05
COL9A2-207ENST00000482722 AMFRQ9UKV5 643 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 PCDHB13Q9Y5F0 798 aa15.38■□□□□ 0.05
COL9A2-207ENST00000482722 NRXN2Q9P2S2 1712 aa15.37■□□□□ 0.05
COL9A2-207ENST00000482722 IGSF9BQ9UPX0 1349 aa15.37■□□□□ 0.05
COL9A2-207ENST00000482722 GOLGA6L10A0A0M3HER8 536 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms