RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 KSR1Q8IVT5 923 aa13.48□□□□□ -0.25
FAM3D-202ENST00000482623 TPH2Q8IWU9 490 aa13.48□□□□□ -0.25
FAM3D-202ENST00000482623 TMEM87AQ8NBN3 555 aa13.48□□□□□ -0.25
FAM3D-202ENST00000482623 NSUN7Q8NE18 718 aaKnown RBP13.48□□□□□ -0.25
FAM3D-202ENST00000482623 TMEM143Q96AN5 459 aa13.48□□□□□ -0.25
FAM3D-202ENST00000482623 DYDC2Q96IM9 177 aa13.48□□□□□ -0.25
FAM3D-202ENST00000482623 RIPOR3Q96MK2 946 aa13.48□□□□□ -0.25
FAM3D-202ENST00000482623 MTMR9Q96QG7 549 aa13.48□□□□□ -0.25
FAM3D-202ENST00000482623 MTRQ99707 1265 aa13.48□□□□□ -0.25
FAM3D-202ENST00000482623 EIF2AK1Q9BQI3 630 aaKnown RBP13.48□□□□□ -0.25
FAM3D-202ENST00000482623 SH2D3AQ9BRG2 576 aa13.48□□□□□ -0.25
FAM3D-202ENST00000482623 RHOBTB2Q9BYZ6 727 aa13.48□□□□□ -0.25
FAM3D-202ENST00000482623 TTC12Q9H892 705 aaPredicted RBP13.48□□□□□ -0.25
FAM3D-202ENST00000482623 RSAD1Q9HA92 442 aa13.48□□□□□ -0.25
FAM3D-202ENST00000482623 RGL1Q9NZL6 768 aa13.48□□□□□ -0.25
FAM3D-202ENST00000482623 USTQ9Y2C2 406 aa13.48□□□□□ -0.25
FAM3D-202ENST00000482623 HCFC2Q9Y5Z7 792 aa13.48□□□□□ -0.25
FAM3D-202ENST00000482623 C5orf42Q9H799 3197 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 ARL2P36404 184 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 NEK4P51957 841 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 SIGLEC14Q08ET2 396 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 NR5A1Q13285 461 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 SAFBQ15424 915 aaKnown RBP eCLIP13.47□□□□□ -0.25
FAM3D-202ENST00000482623 EARS2Q5JPH6 523 aaKnown RBP13.47□□□□□ -0.25
FAM3D-202ENST00000482623 ATAT1Q5SQI0 421 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 NCAPH2Q6IBW4 605 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 NOTUMQ6P988 496 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 HFE2Q6ZVN8 426 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 UBALD2Q8IYN6 164 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 HACE1Q8IYU2 909 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 PLCD3Q8N3E9 789 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 ZNF579Q8NAF0 562 aaKnown RBP13.47□□□□□ -0.25
FAM3D-202ENST00000482623 RNF149Q8NC42 400 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 FAM193BQ96PV7 902 aaPredicted RBP13.47□□□□□ -0.25
FAM3D-202ENST00000482623 EMILIN2Q9BXX0 1053 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 IRF2BPLQ9H1B7 796 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 FAN1Q9Y2M0 1017 aa13.47□□□□□ -0.25
FAM3D-202ENST00000482623 TMEM221A6NGB7 291 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 BTBD18B2RXH4 712 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 M0R296 226 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 NEMFO60524 1076 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 LILRB3O75022 631 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 ZC3H11AO75152 810 aaKnown RBP eCLIP13.46□□□□□ -0.25
FAM3D-202ENST00000482623 NR1I2O75469 434 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 ERLIN2O94905 339 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 CSPG5O95196 566 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 CTTNQ14247 550 aaKnown RBP13.46□□□□□ -0.25
FAM3D-202ENST00000482623 UBXN11Q5T124 520 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 ELMSAN1Q6PJG2 1045 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 DIS3L2Q8IYB7 885 aaKnown RBP13.46□□□□□ -0.25
FAM3D-202ENST00000482623 SLC22A17Q8WUG5 538 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 HDAC7Q8WUI4 952 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 RPGRIP1Q96KN7 1286 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 PRIMPOLQ96LW4 560 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 NACC1Q96RE7 527 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 POLR3CQ9BUI4 534 aaPredicted RBP13.46□□□□□ -0.25
FAM3D-202ENST00000482623 CSRNP2Q9H175 543 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 MINDY3Q9H8M7 445 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 TUFT1Q9NNX1 390 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 GJB4Q9NTQ9 266 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 DBR1Q9UK59 544 aaKnown RBP13.46□□□□□ -0.25
FAM3D-202ENST00000482623 LIMCH1Q9UPQ0 1083 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 GIT1Q9Y2X7 761 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 STK24Q9Y6E0 443 aa13.46□□□□□ -0.25
FAM3D-202ENST00000482623 A0A1B0GUA9 196 aa13.45□□□□□ -0.26
FAM3D-202ENST00000482623 PAPLNO95428 1278 aa13.45□□□□□ -0.26
FAM3D-202ENST00000482623 ITGA4P13612 1032 aa13.45□□□□□ -0.26
FAM3D-202ENST00000482623 PBX3P40426 434 aa13.45□□□□□ -0.26
FAM3D-202ENST00000482623 TRAPPC10P48553 1259 aa13.45□□□□□ -0.26
FAM3D-202ENST00000482623 SLC11A1P49279 550 aa13.45□□□□□ -0.26
FAM3D-202ENST00000482623 RARRES1P49788 294 aa13.45□□□□□ -0.26
FAM3D-202ENST00000482623 PTPN21Q16825 1174 aa13.45□□□□□ -0.26
FAM3D-202ENST00000482623 ZDHHC14Q8IZN3 488 aa13.45□□□□□ -0.26
FAM3D-202ENST00000482623 NECAB1Q8N987 351 aa13.45□□□□□ -0.26
FAM3D-202ENST00000482623 MCPH1Q8NEM0 835 aa13.45□□□□□ -0.26
FAM3D-202ENST00000482623 LPPQ93052 612 aa13.45□□□□□ -0.26
FAM3D-202ENST00000482623 PBXIP1Q96AQ6 731 aa13.45□□□□□ -0.26
FAM3D-202ENST00000482623 ZSCAN31Q96LW9 406 aaPredicted RBP13.45□□□□□ -0.26
FAM3D-202ENST00000482623 FOXP1Q9H334 677 aaPredicted RBP13.45□□□□□ -0.26
FAM3D-202ENST00000482623 XPNPEP1Q9NQW7 623 aa13.45□□□□□ -0.26
FAM3D-202ENST00000482623 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.44□□□□□ -0.26
FAM3D-202ENST00000482623 NT5C1B-RDH14C9J2C7 533 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 TSPAN1O60635 241 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 EFEMP2O95967 443 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 SOD2P04179 222 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 TXKP42681 527 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 HMGN5P82970 282 aaKnown RBP13.44□□□□□ -0.26
FAM3D-202ENST00000482623 RBM10P98175 930 aaKnown RBP13.44□□□□□ -0.26
FAM3D-202ENST00000482623 CYP4A11Q02928 519 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 DSC1Q08554 894 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 PTPN14Q15678 1187 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 FAM187BQ17R55 369 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 KIAA1841Q6NSI8 718 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 LLGL2Q6P1M3 1020 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 PPP4R3CPQ6ZMV5 832 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 C15orf39Q6ZRI6 1047 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 ZNF280BQ86YH2 543 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 FBXL6Q8N531 539 aa13.44□□□□□ -0.26
FAM3D-202ENST00000482623 SMG8Q8ND04 991 aaKnown RBP13.44□□□□□ -0.26
FAM3D-202ENST00000482623 CMASQ8NFW8 434 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms