RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 TBX20Q9UMR3 447 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 SNX12Q9UMY4 172 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 GFPT2O94808 682 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 MAGEA1P43355 309 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 DNA2P51530 1060 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 PPIL2Q13356 520 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 CCDC70Q6NSX1 233 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 EMSYQ7Z589 1322 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 ACCSQ96QU6 501 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 PDGFCQ9NRA1 345 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 NFASCO94856 1347 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 IGSF9BQ9UPX0 1349 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 GSTTP1A0A1W2PQM5 241 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 LRRIQ3A6PVS8 624 aaPredicted RBP15.7■□□□□ 0.1
CHD3-211ENST00000481999 CXCL11O14625 94 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 NCK2O43639 380 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 GGPS1O95749 300 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 SERPING1P05155 500 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 PRLRP16471 622 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 CNGA1P29973 690 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 HNRNPH2P55795 449 aaKnown RBP15.7■□□□□ 0.1
CHD3-211ENST00000481999 ASIC2Q16515 512 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 PHLDB3Q6NSJ2 640 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 CCDC102AQ96A19 550 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 ALS2CR12Q96Q35 445 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 IWS1Q96ST2 819 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 POLR3FQ9H1D9 316 aaPredicted RBP15.7■□□□□ 0.1
CHD3-211ENST00000481999 GOLPH3Q9H4A6 298 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 ZNF302Q9NR11 478 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 UBE4BO95155 1302 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 CXCR5P32302 372 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 LMAN1P49257 510 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 ITIH3Q06033 890 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 ARHGAP44Q17R89 818 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 MIS18BP1Q6P0N0 1132 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 OTUD6AQ7L8S5 288 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 KAT5Q92993 513 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 CDHR1Q96JP9 859 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 NUCKS1Q9H1E3 243 aaKnown RBP15.7■□□□□ 0.1
CHD3-211ENST00000481999 GPBP1L1Q9HC44 474 aaPredicted RBP15.7■□□□□ 0.1
CHD3-211ENST00000481999 ACP6Q9NPH0 428 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 PDLIM7Q9NR12 457 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 SMARCAL1Q9NZC9 954 aa15.7■□□□□ 0.1
CHD3-211ENST00000481999 N4BP1O75113 896 aaKnown RBP15.69■□□□□ 0.1
CHD3-211ENST00000481999 EDNRBP24530 442 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 MYL7Q01449 175 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 ZC3H15Q8WU90 426 aaKnown RBP15.69■□□□□ 0.1
CHD3-211ENST00000481999 PLCB1Q9NQ66 1216 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 AIPL1Q9NZN9 384 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 SSU72P8A0A1W2PR75 194 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 IQCA1LA6NCM1 817 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 PDE2AO00408 941 aaPredicted RBP15.69■□□□□ 0.1
CHD3-211ENST00000481999 EDN1P05305 212 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 KLRC1P26715 233 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 TCF7P36402 384 aaPredicted RBP15.69■□□□□ 0.1
CHD3-211ENST00000481999 AARSP49588 968 aaKnown RBP eCLIP15.69■□□□□ 0.1
CHD3-211ENST00000481999 POLGP54098 1239 aaPredicted RBP15.69■□□□□ 0.1
CHD3-211ENST00000481999 MAPK8IP2Q13387 824 aaPredicted RBP15.69■□□□□ 0.1
CHD3-211ENST00000481999 EMC2Q15006 297 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 LMBRD2Q68DH5 695 aaPredicted RBP15.69■□□□□ 0.1
CHD3-211ENST00000481999 ZNF572Q7Z3I7 529 aaPredicted RBP15.69■□□□□ 0.1
CHD3-211ENST00000481999 ZNF784Q8NCA9 323 aaPredicted RBP15.69■□□□□ 0.1
CHD3-211ENST00000481999 ASAP3Q8TDY4 903 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 HINFPQ9BQA5 517 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 MKNK1Q9BUB5 465 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 GPR88Q9GZN0 384 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 TMEM206Q9H813 350 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 EHD2Q9NZN4 543 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 FBXO40Q9UH90 709 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 FAN1Q9Y2M0 1017 aa15.69■□□□□ 0.1
CHD3-211ENST00000481999 MAFBQ9Y5Q3 323 aaPredicted RBP15.69■□□□□ 0.1
CHD3-211ENST00000481999 TTLL13PA6NNM8 815 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 PJA2O43164 708 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 MAPTP10636 758 aaKnown RBP15.68■□□□□ 0.1
CHD3-211ENST00000481999 VAMP7P51809 220 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 WNT7BP56706 349 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 JAM2P57087 298 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 NFIL3Q16649 462 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 CREG2Q8IUH2 290 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 ARHGEF19Q8IW93 802 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 XXYLT1Q8NBI6 393 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 RDM1Q8NG50 284 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 LMO3Q8TAP4 145 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 SYN2Q92777 582 aaPredicted RBP15.68■□□□□ 0.1
CHD3-211ENST00000481999 SLC10A4Q96EP9 437 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 INTS2Q9H0H0 1204 aaKnown RBP15.68■□□□□ 0.1
CHD3-211ENST00000481999 DNAJC12Q9UKB3 198 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 PACSIN2Q9UNF0 486 aaPredicted RBP15.68■□□□□ 0.1
CHD3-211ENST00000481999 HNRNPDLO14979 420 aaKnown RBP15.68■□□□□ 0.1
CHD3-211ENST00000481999 DGAT1O75907 488 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 OATP04181 439 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 TCP1P17987 556 aaKnown RBP15.68■□□□□ 0.1
CHD3-211ENST00000481999 ICAM3P32942 547 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 TNNT3P45378 269 aaPredicted RBP15.68■□□□□ 0.1
CHD3-211ENST00000481999 NAP1L1P55209 391 aaKnown RBP15.68■□□□□ 0.1
CHD3-211ENST00000481999 SNRNP35Q16560 246 aaKnown RBP15.68■□□□□ 0.1
CHD3-211ENST00000481999 SLC18A3Q16572 532 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 KCTD19Q17RG1 926 aaPredicted RBP15.68■□□□□ 0.1
CHD3-211ENST00000481999 SEZ6Q53EL9 994 aa15.68■□□□□ 0.1
CHD3-211ENST00000481999 LDLRAD1Q5T700 205 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms