RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 CHMP2AO43633 222 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 GAS2O43903 313 aaKnown RBP12.92□□□□□ -0.34
GARNL3-217ENST00000481875 OFD1O75665 1012 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 P4HBP07237 508 aaKnown RBP12.92□□□□□ -0.34
GARNL3-217ENST00000481875 IBSPP21815 317 aaPredicted RBP12.92□□□□□ -0.34
GARNL3-217ENST00000481875 PBX3P40426 434 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 MTHFRP42898 656 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 QARSP47897 775 aaKnown RBP12.92□□□□□ -0.34
GARNL3-217ENST00000481875 MTERF2Q49AM1 385 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 IER5LQ5T953 404 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 GLB1LQ6UWU2 654 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 SRGAP1Q7Z6B7 1085 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 C4orf19Q8IY42 314 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 PRSS33Q8NF86 280 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 GJA10Q969M2 543 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 INTS4Q96HW7 963 aaKnown RBP12.92□□□□□ -0.34
GARNL3-217ENST00000481875 SCLT1Q96NL6 688 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 PHF20Q9BVI0 1012 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 CYP26B1Q9NR63 512 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 AGPAT5Q9NUQ2 364 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 TBC1D13Q9NVG8 400 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 DDX25Q9UHL0 483 aaKnown RBP12.92□□□□□ -0.34
GARNL3-217ENST00000481875 VAV3Q9UKW4 847 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 KIF3AQ9Y496 699 aa12.92□□□□□ -0.34
GARNL3-217ENST00000481875 MTCL1Q9Y4B5 1905 aaKnown RBP12.92□□□□□ -0.34
GARNL3-217ENST00000481875 STK36Q9NRP7 1315 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 DDX11L8A8MPP1 907 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 EML1O00423 815 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 INPPL1O15357 1258 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 ASAP2O43150 1006 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 CSDE1O75534 798 aaKnown RBP12.91□□□□□ -0.34
GARNL3-217ENST00000481875 PAPLNO95428 1278 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 CXCL14O95715 111 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 C1RP00736 705 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 GALTP07902 379 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 FDPSP14324 419 aaKnown RBP12.91□□□□□ -0.34
GARNL3-217ENST00000481875 XBP1P17861 261 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 FGFR4P22455 802 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 GJB2P29033 226 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 HOXA11P31270 313 aaPredicted RBP12.91□□□□□ -0.34
GARNL3-217ENST00000481875 RFC5P40937 340 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 PSEN1P49768 467 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 POU5F1BQ06416 359 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 TCF15Q12870 199 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 NOMO2Q5JPE7 1267 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 TWF2Q6IBS0 349 aaKnown RBP12.91□□□□□ -0.34
GARNL3-217ENST00000481875 PPFIBP1Q86W92 1011 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 RHPN2Q8IUC4 686 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 ZDHHC14Q8IZN3 488 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 VPS52Q8N1B4 723 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 SLC22A17Q8WUG5 538 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 SLC7A3Q8WY07 619 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 PGBD4Q96DM1 585 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 ZNF668Q96K58 619 aaPredicted RBP12.91□□□□□ -0.34
GARNL3-217ENST00000481875 RIPOR3Q96MK2 946 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 NAP1L4Q99733 375 aaKnown RBP12.91□□□□□ -0.34
GARNL3-217ENST00000481875 RHOBTB2Q9BYZ6 727 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 NRDE2Q9H7Z3 1164 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 KANSL3Q9P2N6 904 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 SORCS3Q9UPU3 1222 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 WDR87Q6ZQQ6 2873 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 DMDP11532 3685 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 SPTBN4Q9H254 2564 aa12.91□□□□□ -0.34
GARNL3-217ENST00000481875 CNTNAP2Q9UHC6 1331 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 ARID2Q68CP9 1835 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 TMEM150BA6NC51 233 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 SLC37A4O43826 429 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 LILRB3O75022 631 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 EFEMP2O95967 443 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 AVPR2P30518 371 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 FOSBP53539 338 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 SPIRE1Q08AE8 756 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 EPHA7Q15375 998 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 INF2Q27J81 1249 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 ATAT1Q5SQI0 421 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 KIAA1841Q6NSI8 718 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 NEK8Q86SG6 692 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 TMEM173Q86WV6 379 aaPredicted RBP12.9□□□□□ -0.34
GARNL3-217ENST00000481875 RNF169Q8NCN4 708 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 HAS1Q92839 578 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 AIFM3Q96NN9 605 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 TMEM175Q9BSA9 504 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 POMKQ9H5K3 350 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 PIN4Q9Y237 131 aaKnown RBP12.9□□□□□ -0.34
GARNL3-217ENST00000481875 PCDHB2Q9Y5E7 798 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 COL4A3BPQ9Y5P4 624 aa12.9□□□□□ -0.34
GARNL3-217ENST00000481875 C2orf16Q68DN1 1984 aa12.89□□□□□ -0.35
GARNL3-217ENST00000481875 NT5C1B-RDH14C9J2C7 533 aa12.89□□□□□ -0.35
GARNL3-217ENST00000481875 ZC3H11AO75152 810 aaKnown RBP eCLIP12.89□□□□□ -0.35
GARNL3-217ENST00000481875 MTMR3Q13615 1198 aa12.89□□□□□ -0.35
GARNL3-217ENST00000481875 TRIM29Q14134 588 aa12.89□□□□□ -0.35
GARNL3-217ENST00000481875 LLGL2Q6P1M3 1020 aa12.89□□□□□ -0.35
GARNL3-217ENST00000481875 AGMOQ6ZNB7 445 aa12.89□□□□□ -0.35
GARNL3-217ENST00000481875 OTUD6AQ7L8S5 288 aa12.89□□□□□ -0.35
GARNL3-217ENST00000481875 CATSPER4Q7RTX7 472 aa12.89□□□□□ -0.35
GARNL3-217ENST00000481875 CNNM3Q8NE01 707 aa12.89□□□□□ -0.35
GARNL3-217ENST00000481875 TCP11Q8WWU5 503 aa12.89□□□□□ -0.35
GARNL3-217ENST00000481875 PRPF31Q8WWY3 499 aaKnown RBP12.89□□□□□ -0.35
GARNL3-217ENST00000481875 PSPC1Q8WXF1 523 aaKnown RBP12.89□□□□□ -0.35
GARNL3-217ENST00000481875 UBN1Q9NPG3 1134 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms