RNA–Protein interactions for RNA: ENST00000481408.5

SGSM3-212, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-212ENST00000481408 TMC7Q7Z402 723 aa18.25■□□□□ 0.51
SGSM3-212ENST00000481408 SMRP1Q8NCR6 262 aa18.25■□□□□ 0.51
SGSM3-212ENST00000481408 POLR3CQ9BUI4 534 aaPredicted RBP18.25■□□□□ 0.51
SGSM3-212ENST00000481408 POLR3FQ9H1D9 316 aaPredicted RBP18.25■□□□□ 0.51
SGSM3-212ENST00000481408 NRDE2Q9H7Z3 1164 aa18.25■□□□□ 0.51
SGSM3-212ENST00000481408 NOL7Q9UMY1 257 aaKnown RBP18.25■□□□□ 0.51
SGSM3-212ENST00000481408 FSD2A1L4K1 749 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 INO80B-WBP1J3KQ70 363 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 ST18O60284 1047 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 RPA1P27694 616 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 AXLP30530 894 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 AFF1P51825 1210 aaKnown RBP18.24■□□□□ 0.51
SGSM3-212ENST00000481408 RNASELQ05823 741 aaKnown RBP18.24■□□□□ 0.51
SGSM3-212ENST00000481408 MBTD1Q05BQ5 628 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 KCNC3Q14003 757 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 AMHR2Q16671 573 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 POTEGQ6S5H5 508 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 TMEM173Q86WV6 379 aaPredicted RBP18.24■□□□□ 0.51
SGSM3-212ENST00000481408 C4orf32Q8N8J7 132 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 ERMNQ8TAM6 284 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 NACC1Q96RE7 527 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 NFKBIZQ9BYH8 718 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 RSAD1Q9HA92 442 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 GPRC5CQ9NQ84 441 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 DNAJB4Q9UDY4 337 aa18.24■□□□□ 0.51
SGSM3-212ENST00000481408 DBR1Q9UK59 544 aaKnown RBP18.24■□□□□ 0.51
SGSM3-212ENST00000481408 B4GALT3O60512 393 aa18.23■□□□□ 0.51
SGSM3-212ENST00000481408 GALTP07902 379 aa18.23■□□□□ 0.51
SGSM3-212ENST00000481408 NCLP19338 710 aaKnown RBP18.23■□□□□ 0.51
SGSM3-212ENST00000481408 COL9A1P20849 921 aa18.23■□□□□ 0.51
SGSM3-212ENST00000481408 TOB1P50616 345 aaPredicted RBP18.23■□□□□ 0.51
SGSM3-212ENST00000481408 NOTUMQ6P988 496 aa18.23■□□□□ 0.51
SGSM3-212ENST00000481408 MAEAQ7L5Y9 396 aa18.23■□□□□ 0.51
SGSM3-212ENST00000481408 ZNF280BQ86YH2 543 aa18.23■□□□□ 0.51
SGSM3-212ENST00000481408 MRPL43Q8N983 215 aaKnown RBP18.23■□□□□ 0.51
SGSM3-212ENST00000481408 SMG8Q8ND04 991 aaKnown RBP18.23■□□□□ 0.51
SGSM3-212ENST00000481408 URGCPQ8TCY9 931 aa18.23■□□□□ 0.51
SGSM3-212ENST00000481408 TMEM169Q96HH4 297 aa18.23■□□□□ 0.51
SGSM3-212ENST00000481408 CPB2Q96IY4 423 aa18.23■□□□□ 0.51
SGSM3-212ENST00000481408 EIF2AQ9BY44 585 aaKnown RBP18.23■□□□□ 0.51
SGSM3-212ENST00000481408 GBP3Q9H0R5 595 aa18.23■□□□□ 0.51
SGSM3-212ENST00000481408 CNTNAP2Q9UHC6 1331 aa18.23■□□□□ 0.51
SGSM3-212ENST00000481408 CARNS1A5YM72 827 aa18.22■□□□□ 0.51
SGSM3-212ENST00000481408 CD2BP2O95400 341 aaKnown RBP18.22■□□□□ 0.51
SGSM3-212ENST00000481408 SLC11A1P49279 550 aa18.22■□□□□ 0.51
SGSM3-212ENST00000481408 FXR2P51116 673 aaKnown RBP eCLIP18.22■□□□□ 0.51
SGSM3-212ENST00000481408 NCBP1Q09161 790 aaKnown RBP18.22■□□□□ 0.51
SGSM3-212ENST00000481408 SMC1AQ14683 1233 aaKnown RBP18.22■□□□□ 0.51
SGSM3-212ENST00000481408 TMEM184AQ6ZMB5 413 aa18.22■□□□□ 0.51
SGSM3-212ENST00000481408 CNNM3Q8NE01 707 aa18.22■□□□□ 0.51
SGSM3-212ENST00000481408 MCPH1Q8NEM0 835 aa18.22■□□□□ 0.51
SGSM3-212ENST00000481408 BCL7CQ8WUZ0 217 aaPredicted RBP18.22■□□□□ 0.51
SGSM3-212ENST00000481408 CCDC51Q96ER9 411 aa18.22■□□□□ 0.51
SGSM3-212ENST00000481408 IGSF21Q96ID5 467 aa18.22■□□□□ 0.51
SGSM3-212ENST00000481408 TMX3Q96JJ7 454 aa18.22■□□□□ 0.51
SGSM3-212ENST00000481408 UPF2Q9HAU5 1272 aaKnown RBP18.22■□□□□ 0.51
SGSM3-212ENST00000481408 C11orf16Q9NQ32 467 aa18.22■□□□□ 0.51
SGSM3-212ENST00000481408 USP15Q9Y4E8 981 aaPredicted RBP18.22■□□□□ 0.51
SGSM3-212ENST00000481408 IPPQ9Y573 584 aa18.22■□□□□ 0.51
SGSM3-212ENST00000481408 PCDHB6Q9Y5E3 794 aa18.22■□□□□ 0.51
SGSM3-212ENST00000481408 C2orf71A6NGG8 1288 aa18.21■□□□□ 0.51
SGSM3-212ENST00000481408 B4GALT5O43286 388 aa18.21■□□□□ 0.51
SGSM3-212ENST00000481408 DDHD2O94830 711 aa18.21■□□□□ 0.51
SGSM3-212ENST00000481408 ITGA4P13612 1032 aa18.21■□□□□ 0.51
SGSM3-212ENST00000481408 ARF4P18085 180 aaPredicted RBP18.21■□□□□ 0.51
SGSM3-212ENST00000481408 HAUS3Q68CZ6 603 aa18.21■□□□□ 0.51
SGSM3-212ENST00000481408 DDX53Q86TM3 631 aaKnown RBP18.21■□□□□ 0.51
SGSM3-212ENST00000481408 VPS52Q8N1B4 723 aa18.21■□□□□ 0.51
SGSM3-212ENST00000481408 POP1Q99575 1024 aaKnown RBP18.21■□□□□ 0.51
SGSM3-212ENST00000481408 LRFN3Q9BTN0 628 aa18.21■□□□□ 0.51
SGSM3-212ENST00000481408 CSRNP2Q9H175 543 aa18.21■□□□□ 0.51
SGSM3-212ENST00000481408 RNF39Q9H2S5 420 aa18.21■□□□□ 0.51
SGSM3-212ENST00000481408 KANSL3Q9P2N6 904 aa18.21■□□□□ 0.51
SGSM3-212ENST00000481408 KIF3AQ9Y496 699 aa18.21■□□□□ 0.51
SGSM3-212ENST00000481408 HES2Q9Y543 173 aa18.21■□□□□ 0.51
SGSM3-212ENST00000481408 LRRIQ4A6NIV6 560 aa18.2■□□□□ 0.5
SGSM3-212ENST00000481408 CXCL14O95715 111 aa18.2■□□□□ 0.5
SGSM3-212ENST00000481408 POMCP01189 267 aa18.2■□□□□ 0.5
SGSM3-212ENST00000481408 SRGAP2BP0DMP2 458 aa18.2■□□□□ 0.5
SGSM3-212ENST00000481408 MUTP22033 750 aa18.2■□□□□ 0.5
SGSM3-212ENST00000481408 CCT6AP40227 531 aaKnown RBP18.2■□□□□ 0.5
SGSM3-212ENST00000481408 PTGDRQ13258 359 aa18.2■□□□□ 0.5
SGSM3-212ENST00000481408 ECM1Q16610 540 aa18.2■□□□□ 0.5
SGSM3-212ENST00000481408 TMEM31Q5JXX7 168 aa18.2■□□□□ 0.5
SGSM3-212ENST00000481408 LLGL2Q6P1M3 1020 aa18.2■□□□□ 0.5
SGSM3-212ENST00000481408 PADI6Q6TGC4 694 aa18.2■□□□□ 0.5
SGSM3-212ENST00000481408 ZBP1Q9H171 429 aa18.2■□□□□ 0.5
SGSM3-212ENST00000481408 UBN1Q9NPG3 1134 aa18.2■□□□□ 0.5
SGSM3-212ENST00000481408 LRWD1Q9UFC0 647 aa18.2■□□□□ 0.5
SGSM3-212ENST00000481408 RAPGEFL1Q9UHV5 662 aa18.2■□□□□ 0.5
SGSM3-212ENST00000481408 ARHGEF35A5YM69 484 aa18.19■□□□□ 0.5
SGSM3-212ENST00000481408 FAM86C2PA6NEL3 165 aa18.19■□□□□ 0.5
SGSM3-212ENST00000481408 INPPL1O15357 1258 aa18.19■□□□□ 0.5
SGSM3-212ENST00000481408 GPR37L1O60883 481 aa18.19■□□□□ 0.5
SGSM3-212ENST00000481408 ALADP13716 330 aa18.19■□□□□ 0.5
SGSM3-212ENST00000481408 CYP11B2P19099 503 aa18.19■□□□□ 0.5
SGSM3-212ENST00000481408 CA8P35219 290 aa18.19■□□□□ 0.5
SGSM3-212ENST00000481408 PDIA5Q14554 519 aa18.19■□□□□ 0.5
SGSM3-212ENST00000481408 BMS1Q14692 1282 aaKnown RBP18.19■□□□□ 0.5
SGSM3-212ENST00000481408 CDCA2Q69YH5 1023 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms