RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 PLTPP55058 493 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 RBP5P82980 135 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 OXER1Q8TDS5 423 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 SH3TC2Q8TF17 1288 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 SCG3Q8WXD2 468 aaKnown RBP10.11□□□□□ -0.79
GARNL3-216ENST00000481242 C17orf75Q9HAS0 396 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 ERAP1Q9NZ08 941 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 IP6K2Q9UHH9 426 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 KIAA1210Q9ULL0 1709 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 PTPN22Q9Y2R2 807 aa10.11□□□□□ -0.79
GARNL3-216ENST00000481242 A8MXQ7 604 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 DYNC1LI2O43237 492 aaPredicted RBP10.1□□□□□ -0.79
GARNL3-216ENST00000481242 CHEK2O96017 543 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 HOXC6P09630 235 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 CPT1AP50416 773 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 FCGRTP55899 365 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 PSMD6Q15008 389 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 EFHC2Q5JST6 749 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 ITPRIPL1Q6GPH6 555 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 RWDD4Q6NW29 188 aaKnown RBP10.1□□□□□ -0.79
GARNL3-216ENST00000481242 MGARPQ8TDB4 240 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 GPRASP2Q96D09 838 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 KIF12Q96FN5 646 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 CNOT10Q9H9A5 744 aaKnown RBP10.1□□□□□ -0.79
GARNL3-216ENST00000481242 ANKEF1Q9NU02 776 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 INTS9Q9NV88 658 aaKnown RBP10.1□□□□□ -0.79
GARNL3-216ENST00000481242 PRMT7Q9NVM4 692 aaPredicted RBP10.1□□□□□ -0.79
GARNL3-216ENST00000481242 PIK3C2BO00750 1634 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 IQANK1A0A1B0GTG1 560 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 KRT37O76014 449 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 ALDH1A1P00352 501 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 PDHBP11177 359 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 DDX56Q9NY93 547 aaKnown RBP10.1□□□□□ -0.79
GARNL3-216ENST00000481242 HIP1RO75146 1068 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 GYS1P13807 737 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 CPB1P15086 417 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 PRCPP42785 496 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 JADE1Q6IE81 842 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 RNF180Q86T96 592 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 GLT1D1Q96MS3 346 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 KIF2CQ99661 725 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 MYO3AQ8NEV4 1616 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 IL18RAPO95256 599 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 SERPINB6P35237 376 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 DYNLT1P63172 113 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 PTPROQ16827 1216 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 TAF1BQ53T94 588 aaPredicted RBP10.1□□□□□ -0.79
GARNL3-216ENST00000481242 CAPN12Q6ZSI9 719 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 STAG2Q8N3U4 1231 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 IGDCC4Q8TDY8 1250 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 SDCCAG3Q96C92 435 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 SAAL1Q96ER3 474 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 ZDHHC15Q96MV8 337 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 TUBB6Q9BUF5 446 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 PHF20Q9BVI0 1012 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 MROH8Q9H579 483 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 EPB41L5Q9HCM4 733 aa10.1□□□□□ -0.79
GARNL3-216ENST00000481242 AP3B1O00203 1094 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 CHUKO15111 745 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 MOCS3O95396 460 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 MUTP22033 750 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 GNA15P30679 374 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 PCK1P35558 622 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 CDK17Q00537 523 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 DR1Q01658 176 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 TSTA3Q13630 321 aaPredicted RBP10.09□□□□□ -0.79
GARNL3-216ENST00000481242 GLB1LQ6UWU2 654 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 PYROXD1Q8WU10 500 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 RMDN2Q96LZ7 410 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 POLR1AO95602 1720 aaPredicted RBP10.09□□□□□ -0.79
GARNL3-216ENST00000481242 BUB1BO60566 1050 aaPredicted RBP10.09□□□□□ -0.79
GARNL3-216ENST00000481242 RGS2P41220 211 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 ARL4CP56559 192 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 DGKDQ16760 1214 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 MMEL1Q495T6 779 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 PPP6R3Q5H9R7 873 aaPredicted RBP10.09□□□□□ -0.79
GARNL3-216ENST00000481242 SPDYE1Q8NFV5 336 aaPredicted RBP10.09□□□□□ -0.79
GARNL3-216ENST00000481242 FMO2Q99518 471 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 EHD4Q9H223 541 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 KLHL8Q9P2G9 620 aaPredicted RBP10.09□□□□□ -0.79
GARNL3-216ENST00000481242 PIN4Q9Y237 131 aaKnown RBP10.09□□□□□ -0.79
GARNL3-216ENST00000481242 FAN1Q9Y2M0 1017 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 M0QYV0 167 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 EZH2Q15910 746 aaKnown RBP10.09□□□□□ -0.79
GARNL3-216ENST00000481242 EMBQ6PCB8 327 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 CAPS2Q9BXY5 557 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 INTS2Q9H0H0 1204 aaKnown RBP10.09□□□□□ -0.79
GARNL3-216ENST00000481242 FAM217BQ9NTX9 383 aaPredicted RBP10.09□□□□□ -0.79
GARNL3-216ENST00000481242 ZDHHC9Q9Y397 364 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 PITPNM2Q9BZ72 1349 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 H3BRJ5 948 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 CELF2O95319 508 aaKnown RBP10.09□□□□□ -0.79
GARNL3-216ENST00000481242 TTC4O95801 387 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 FTCDO95954 541 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 PSMC1P62191 440 aaKnown RBP10.09□□□□□ -0.79
GARNL3-216ENST00000481242 NR1H3Q13133 447 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 BBS9Q3SYG4 887 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 BTBD8Q5XKL5 378 aa10.09□□□□□ -0.79
GARNL3-216ENST00000481242 CC2D1AQ6P1N0 951 aaPredicted RBP10.09□□□□□ -0.79
GARNL3-216ENST00000481242 INTS5Q6P9B9 1019 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms