RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 CYP39A1Q9NYL5 469 aa20.73■□□□□ 0.91
CCM2-214ENST00000481194 A6NJR5 290 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 SOX5P35711 763 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 NR1I3Q14994 352 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 SLC35F6Q8N357 371 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.72■□□□□ 0.91
CCM2-214ENST00000481194 UBIAD1Q9Y5Z9 338 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 V9GYY5 206 aaPredicted RBP20.72■□□□□ 0.91
CCM2-214ENST00000481194 KCNJ6P48051 423 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 NT5DC1Q5TFE4 455 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 SCARA5Q6ZMJ2 495 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 ACRBPQ8NEB7 543 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 A0A1W2PRG0 241 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 ADORA2AP29274 412 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 FMO5P49326 533 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 RGMBQ6NW40 437 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 KLHL7Q8IXQ5 586 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 OR6B3Q8NGW1 331 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 HPS3Q969F9 1004 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 SENP7Q9BQF6 1050 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 TOGARAM1Q9Y4F4 1720 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 MYH3P11055 1940 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 DRAP1Q14919 205 aaPredicted RBP20.72■□□□□ 0.91
CCM2-214ENST00000481194 ERICH1Q86X53 443 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 ARFGAP2Q8N6H7 521 aa20.72■□□□□ 0.91
CCM2-214ENST00000481194 PIN4Q9Y237 131 aaKnown RBP20.72■□□□□ 0.91
CCM2-214ENST00000481194 MESDQ14696 234 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 SCYL2Q6P3W7 929 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 SIX6OS1Q8N1H7 587 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 IQCGQ9H095 443 aaKnown RBP20.71■□□□□ 0.91
CCM2-214ENST00000481194 GOLGA6L7A0A1B0GV03 622 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 ATP8B4Q8TF62 1192 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.71■□□□□ 0.91
CCM2-214ENST00000481194 ZBTB48P10074 688 aaPredicted RBP20.71■□□□□ 0.91
CCM2-214ENST00000481194 RNASE9P60153 205 aaKnown RBP20.71■□□□□ 0.91
CCM2-214ENST00000481194 VSIG10LQ86VR7 867 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 RRAGDQ9NQL2 400 aaPredicted RBP20.71■□□□□ 0.91
CCM2-214ENST00000481194 PABPN1LA6NDY0 278 aaKnown RBP20.71■□□□□ 0.91
CCM2-214ENST00000481194 TEX33O43247 280 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 USP2O75604 605 aaPredicted RBP20.71■□□□□ 0.91
CCM2-214ENST00000481194 HSD17B4P51659 736 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 NPEPPSP55786 919 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 GNASQ5JWF2 1037 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 KIAA1841Q6NSI8 718 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 CD302Q8IX05 232 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 KIF12Q96FN5 646 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 TSPYL1Q9H0U9 437 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 TMEM8AQ9HCN3 771 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 TXNDC16Q9P2K2 825 aa20.71■□□□□ 0.91
CCM2-214ENST00000481194 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.71■□□□□ 0.91
CCM2-214ENST00000481194 GARTP22102 1010 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 STILQ15468 1287 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 IQSEC1Q6DN90 963 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 C12orf42Q96LP6 360 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 SLC38A7Q9NVC3 462 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 BRD3Q15059 726 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 STK33Q9BYT3 514 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 SPTLC3Q9NUV7 552 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 APEX2Q9UBZ4 518 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 TTC26A0AVF1 554 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 SKIP12755 728 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 RBP5P82980 135 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 MORC4Q8TE76 937 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 RSAD2Q8WXG1 361 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 HOMER3Q9NSC5 361 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 FRMPD4Q14CM0 1322 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 CD4P01730 458 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 TRIM49P0CI25 452 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 TRIM49CP0CI26 452 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 GTF2H1P32780 548 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 EVX2Q03828 476 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 NOTUMQ6P988 496 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 RNF10Q8N5U6 811 aaKnown RBP20.7■□□□□ 0.9
CCM2-214ENST00000481194 TSC1Q92574 1164 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 PSMB7Q99436 277 aa20.7■□□□□ 0.9
CCM2-214ENST00000481194 TSPY1Q01534 308 aa20.69■□□□□ 0.9
CCM2-214ENST00000481194 EHHADHQ08426 723 aa20.69■□□□□ 0.9
CCM2-214ENST00000481194 TMEM106CQ9BVX2 250 aa20.69■□□□□ 0.9
CCM2-214ENST00000481194 AGPAT3Q9NRZ7 376 aa20.69■□□□□ 0.9
CCM2-214ENST00000481194 RPUSD2Q8IZ73 545 aaKnown RBP20.69■□□□□ 0.9
CCM2-214ENST00000481194 COL2A1P02458 1487 aaPredicted RBP20.69■□□□□ 0.9
CCM2-214ENST00000481194 SGSM1Q2NKQ1 1148 aa20.69■□□□□ 0.9
CCM2-214ENST00000481194 CCDC25Q86WR0 208 aa20.69■□□□□ 0.9
CCM2-214ENST00000481194 PNMA5Q96PV4 448 aa20.69■□□□□ 0.9
CCM2-214ENST00000481194 PTPN21Q16825 1174 aa20.69■□□□□ 0.9
CCM2-214ENST00000481194 SPIRE2Q8WWL2 714 aa20.69■□□□□ 0.9
CCM2-214ENST00000481194 ADAMTS1Q9UHI8 967 aa20.69■□□□□ 0.9
CCM2-214ENST00000481194 FAM169AQ9Y6X4 670 aa20.69■□□□□ 0.9
CCM2-214ENST00000481194 MIF4GDA9UHW6 222 aaKnown RBP20.68■□□□□ 0.9
CCM2-214ENST00000481194 GPC5P78333 572 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 ZC2HC1CQ53FD0 456 aaPredicted RBP20.68■□□□□ 0.9
CCM2-214ENST00000481194 TMEM270Q6UE05 265 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 MICALCLQ6ZW33 695 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 SARNPP82979 210 aaKnown RBP20.68■□□□□ 0.9
CCM2-214ENST00000481194 GLT1D1Q96MS3 346 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 AFG3L2Q9Y4W6 797 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 H0YHG0 523 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 CLTAP09496 248 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 TMEM132DQ14C87 1099 aa20.68■□□□□ 0.9
CCM2-214ENST00000481194 OR6B2Q6IFH4 312 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms