RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 DNM3Q9UQ16 869 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 FAM50BQ9Y247 325 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 NOC2LQ9Y3T9 749 aaKnown RBP10.06□□□□□ -0.8
VCP-206ENST00000480327 MORC2Q9Y6X9 1032 aaPredicted RBP10.06□□□□□ -0.8
VCP-206ENST00000480327 VPS13AQ96RL7 3174 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 DENND4AQ7Z401 1863 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 A0A087X0B3 334 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 MAGEB2O15479 319 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 VTNP04004 478 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 MUTP22033 750 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 NRIP1P48552 1158 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 ERVFC1P60507 584 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 COASYQ13057 564 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 PAK2Q13177 524 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 DRP2Q13474 957 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 MCM6Q14566 821 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 CSPP1Q1MSJ5 1256 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 TMEM119Q4V9L6 283 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 NAALADL2Q58DX5 795 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 HYIQ5T013 277 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 FAM102BQ5T8I3 360 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 RRAGBQ5VZM2 374 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 PADI6Q6TGC4 694 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 RBM23Q86U06 439 aaKnown RBP10.05□□□□□ -0.8
VCP-206ENST00000480327 KIAA0319LQ8IZA0 1049 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 PRSS33Q8NF86 280 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 EDAQ92838 391 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 TMEM143Q96AN5 459 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 CEP89Q96ST8 783 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 FTHL17Q9BXU8 183 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 CCSER1Q9C0I3 900 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 NT5C3AQ9H0P0 336 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 DBR1Q9UK59 544 aaKnown RBP10.05□□□□□ -0.8
VCP-206ENST00000480327 BARX2Q9UMQ3 279 aaPredicted RBP10.05□□□□□ -0.8
VCP-206ENST00000480327 AKT3Q9Y243 479 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 GINS2Q9Y248 185 aa10.05□□□□□ -0.8
VCP-206ENST00000480327 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.04□□□□□ -0.8
VCP-206ENST00000480327 A0A1B0GVL5 298 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 GOLGA6L4A6NEF3 574 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 C9IYK1 514 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 PER2O15055 1255 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 MAFO75444 373 aaPredicted RBP10.04□□□□□ -0.8
VCP-206ENST00000480327 PLA2G4BP0C869 781 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 XRCC6P12956 609 aaKnown RBP eCLIP10.04□□□□□ -0.8
VCP-206ENST00000480327 TMOD1P28289 359 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 RFC5P40937 340 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 STAT6P42226 847 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 SARSP49591 514 aaKnown RBP10.04□□□□□ -0.8
VCP-206ENST00000480327 NDUFV1P49821 464 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 RAD51AP2Q09MP3 1159 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 KCNC3Q14003 757 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 CBX2Q14781 532 aaPredicted RBP10.04□□□□□ -0.8
VCP-206ENST00000480327 EMC2Q15006 297 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 IER5LQ5T953 404 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 RESP18Q5W5W9 173 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 ADALQ6DHV7 355 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 SLC7A3Q8WY07 619 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 RAD54LQ92698 747 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 DHX58Q96C10 678 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 MTRQ99707 1265 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 CWH43Q9H720 699 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 ATP6V0A4Q9HBG4 840 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 GPRC5CQ9NQ84 441 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 XPNPEP1Q9NQW7 623 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 RGS18Q9NS28 235 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 BLOC1S4Q9NUP1 217 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 RNF19AQ9NV58 838 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 FAM13BQ9NYF5 915 aa10.04□□□□□ -0.8
VCP-206ENST00000480327 SUCLA2Q9P2R7 463 aaPredicted RBP10.04□□□□□ -0.8
VCP-206ENST00000480327 USP15Q9Y4E8 981 aaPredicted RBP10.04□□□□□ -0.8
VCP-206ENST00000480327 C2orf16Q68DN1 1984 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 IGKV6-21A0A0C4DH24 114 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 NPHP3-ACAD11A0A0J9YXS1 232 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 FSCN2O14926 492 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 POLR2DO15514 142 aaKnown RBP10.03□□□□□ -0.8
VCP-206ENST00000480327 SLC26A4O43511 780 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 GADD45BO75293 160 aaPredicted RBP10.03□□□□□ -0.8
VCP-206ENST00000480327 DGAT1O75907 488 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 PFKFB1P16118 471 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 DNM2P50570 870 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 FAM189BP81408 668 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 CACNB1Q02641 598 aaPredicted RBP10.03□□□□□ -0.8
VCP-206ENST00000480327 NFX1Q12986 1120 aaKnown RBP10.03□□□□□ -0.8
VCP-206ENST00000480327 DSC3Q14574 896 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 KIZQ2M2Z5 673 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 LRRC55Q6ZSA7 311 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 BMP8AQ7Z5Y6 402 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 FAM228AQ86W67 206 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 GPBP1Q86WP2 473 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 RHPN2Q8IUC4 686 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 KSR1Q8IVT5 923 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 NME8Q8N427 588 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 LINC01465Q8N7H1 131 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 FSIP1Q8NA03 581 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 SUSD6Q92537 303 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 LARP4BQ92615 738 aaKnown RBP10.03□□□□□ -0.8
VCP-206ENST00000480327 STAMQ92783 540 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 SCLT1Q96NL6 688 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 MAP7D2Q96T17 732 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 POP1Q99575 1024 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms