RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 VWA3BQ502W6 1294 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 HGSNATQ68CP4 663 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 TGFBRAP1Q8WUH2 860 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 AZIN2Q96A70 460 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 SHISA4Q96DD7 197 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.69□□□□□ -0.542e-10■□□□□ 8.8
CHD6-208ENST00000480022 PABPC3Q9H361 631 aaKnown RBP11.69□□□□□ -0.54
CHD6-208ENST00000480022 GMEB1Q9Y692 573 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 SLC4A7Q9Y6M7 1214 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 SKIP12755 728 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 GNAT2P19087 354 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 RCN2Q14257 317 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 WTAPQ15007 396 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 ANKS1AQ92625 1134 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 RNF26Q9BY78 433 aaPredicted RBP11.69□□□□□ -0.54
CHD6-208ENST00000480022 LRMDAQ9H2I8 198 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 EPB41L4BQ9H329 900 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 DDX4Q9NQI0 724 aaKnown RBP11.69□□□□□ -0.54
CHD6-208ENST00000480022 PDP2Q9P2J9 529 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 PRKAG3Q9UGI9 489 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 NOC2LQ9Y3T9 749 aaKnown RBP11.69□□□□□ -0.54
CHD6-208ENST00000480022 GSG1L2A8MUP6 293 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 H0Y3Z8 333 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 ATP5HO75947 161 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 GM2AP17900 193 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 MAGEA10P43363 369 aaPredicted RBP11.68□□□□□ -0.54
CHD6-208ENST00000480022 USP11P51784 963 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 PMS2P54278 862 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 CCDC15Q0P6D6 951 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 IL17AQ16552 155 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 WASHC2DQ5SRD0 308 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 TAOK1Q7L7X3 1001 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 FAM13CQ8NE31 585 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 SH3TC2Q8TF17 1288 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 RMDN2Q96LZ7 410 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 IDI2Q9BXS1 227 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 CCDC113Q9H0I3 377 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 NMRK1Q9NWW6 199 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 KLHL14Q9P2G3 628 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 MAGEA13PA6NCF6 341 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 CETN3O15182 167 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 NKRFO15226 690 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHD6-208ENST00000480022 FAM200BP0CF97 657 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 PICALMQ13492 652 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 EAPPQ56P03 285 aaPredicted RBP11.68□□□□□ -0.54
CHD6-208ENST00000480022 RASIP1Q5U651 963 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 ANGEL2Q5VTE6 544 aaKnown RBP11.68□□□□□ -0.54
CHD6-208ENST00000480022 RNF43Q68DV7 783 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 MAPKAPK5Q8IW41 473 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 FANCBQ8NB91 859 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 NCSTNQ92542 709 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 EDEM3Q9BZQ6 932 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 EPB41L4AQ9HCS5 686 aaPredicted RBP11.68□□□□□ -0.54
CHD6-208ENST00000480022 DCP1AQ9NPI6 582 aaPredicted RBP11.68□□□□□ -0.54
CHD6-208ENST00000480022 DISC1Q9NRI5 854 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 TMOD2Q9NZR1 351 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 FAM198AQ9UFP1 575 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 SCAF8Q9UPN6 1271 aaKnown RBP11.68□□□□□ -0.54
CHD6-208ENST00000480022 FLT1P17948 1338 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 TCP10L2B9ZVM9 353 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 HGSO14964 777 aaPredicted RBP11.68□□□□□ -0.54
CHD6-208ENST00000480022 LMNAP02545 664 aaKnown RBP11.68□□□□□ -0.54
CHD6-208ENST00000480022 AFPP02771 609 aaKnown RBP11.68□□□□□ -0.54
CHD6-208ENST00000480022 OATP04181 439 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 LONP1P36776 959 aaKnown RBP11.68□□□□□ -0.54
CHD6-208ENST00000480022 VHLP40337 213 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 RNASELQ05823 741 aaKnown RBP11.68□□□□□ -0.54
CHD6-208ENST00000480022 MCL1Q07820 350 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 ZNF365Q70YC5 407 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 ATP8B4Q8TF62 1192 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 CNNM2Q9H8M5 875 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 GGA3Q9NZ52 723 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 STOML1Q9UBI4 398 aa11.68□□□□□ -0.54
CHD6-208ENST00000480022 MROH7Q68CQ1 1323 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 ATP9AO75110 1047 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 SERPING1P05155 500 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 POTEIP0CG38 1075 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 POTEJP0CG39 1038 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 ITGA4P13612 1032 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 Q4G0T1 1027 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 CCNJLQ8IV13 435 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 ZFPM1Q8IX07 1006 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 LZICQ8WZA0 190 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 RNF25Q96BH1 459 aaPredicted RBP11.67□□□□□ -0.54
CHD6-208ENST00000480022 IWS1Q96ST2 819 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 CELF4Q9BZC1 486 aaKnown RBP11.67□□□□□ -0.54
CHD6-208ENST00000480022 TRIM31Q9BZY9 425 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 CARD9Q9H257 536 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 DCLRE1BQ9H816 532 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 TJP3O95049 919 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 PPP1R2P41236 205 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 RCAN1P53805 252 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 INHBCP55103 352 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 TCP10Q12799 353 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 LRRC14Q15048 493 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 KCTD19Q17RG1 926 aaPredicted RBP11.67□□□□□ -0.54
CHD6-208ENST00000480022 CNPY1Q3B7I2 92 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 FKBP1CQ5VVH2 108 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 IFNL3Q8IZI9 196 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 TNFRSF25Q93038 417 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms