RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 HDAC7Q8WUI4 952 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 TCP11Q8WWU5 503 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 PSPC1Q8WXF1 523 aaKnown RBP14.89□□□□□ -0.03
ABCF1-206ENST00000479542 CCDC51Q96ER9 411 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 KLHL5Q96PQ7 755 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 NCOA5Q9HCD5 579 aaKnown RBP14.89□□□□□ -0.03
ABCF1-206ENST00000479542 TSHZ2Q9NRE2 1034 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 DBR1Q9UK59 544 aaKnown RBP14.89□□□□□ -0.03
ABCF1-206ENST00000479542 COL4A3BPQ9Y5P4 624 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 MYO15AQ9UKN7 3530 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 CPLX1O14810 134 aa14.88□□□□□ -0.03
ABCF1-206ENST00000479542 PDGFBP01127 241 aaPredicted RBP14.88□□□□□ -0.03
ABCF1-206ENST00000479542 NCLP19338 710 aaKnown RBP14.88□□□□□ -0.03
ABCF1-206ENST00000479542 EPHA7Q15375 998 aa14.88□□□□□ -0.03
ABCF1-206ENST00000479542 OTUD6AQ7L8S5 288 aa14.88□□□□□ -0.03
ABCF1-206ENST00000479542 IFNLR1Q8IU57 520 aaPredicted RBP14.88□□□□□ -0.03
ABCF1-206ENST00000479542 RNF168Q8IYW5 571 aaPredicted RBP14.88□□□□□ -0.03
ABCF1-206ENST00000479542 BCL7CQ8WUZ0 217 aaPredicted RBP14.88□□□□□ -0.03
ABCF1-206ENST00000479542 PRPF31Q8WWY3 499 aaKnown RBP14.88□□□□□ -0.03
ABCF1-206ENST00000479542 LPPQ93052 612 aa14.88□□□□□ -0.03
ABCF1-206ENST00000479542 GJA10Q969M2 543 aa14.88□□□□□ -0.03
ABCF1-206ENST00000479542 NXPE3Q969Y0 559 aa14.88□□□□□ -0.03
ABCF1-206ENST00000479542 VN1R3Q9BXE9 311 aa14.88□□□□□ -0.03
ABCF1-206ENST00000479542 RSAD1Q9HA92 442 aa14.88□□□□□ -0.03
ABCF1-206ENST00000479542 MRPL17Q9NRX2 175 aaKnown RBP14.88□□□□□ -0.03
ABCF1-206ENST00000479542 IGSF9Q9P2J2 1179 aa14.88□□□□□ -0.03
ABCF1-206ENST00000479542 DNAJB4Q9UDY4 337 aa14.88□□□□□ -0.03
ABCF1-206ENST00000479542 LIMD1Q9UGP4 676 aa14.88□□□□□ -0.03
ABCF1-206ENST00000479542 VAV3Q9UKW4 847 aa14.88□□□□□ -0.03
ABCF1-206ENST00000479542 FAN1Q9Y2M0 1017 aa14.88□□□□□ -0.03
ABCF1-206ENST00000479542 CYP46A1Q9Y6A2 500 aa14.88□□□□□ -0.03
ABCF1-206ENST00000479542 PTPRZ1P23471 2315 aaPredicted RBP14.88□□□□□ -0.03
ABCF1-206ENST00000479542 EML1O00423 815 aa14.87□□□□□ -0.03
ABCF1-206ENST00000479542 DDHD2O94830 711 aa14.87□□□□□ -0.03
ABCF1-206ENST00000479542 SOD2P04179 222 aa14.87□□□□□ -0.03
ABCF1-206ENST00000479542 CNPP09543 421 aaKnown RBP14.87□□□□□ -0.03
ABCF1-206ENST00000479542 TDGQ13569 410 aa14.87□□□□□ -0.03
ABCF1-206ENST00000479542 MXD4Q14582 209 aaPredicted RBP14.87□□□□□ -0.03
ABCF1-206ENST00000479542 ELMSAN1Q6PJG2 1045 aa14.87□□□□□ -0.03
ABCF1-206ENST00000479542 CCDC149Q6ZUS6 474 aa14.87□□□□□ -0.03
ABCF1-206ENST00000479542 ZNF280BQ86YH2 543 aa14.87□□□□□ -0.03
ABCF1-206ENST00000479542 C12orf76Q8N812 135 aaPredicted RBP14.87□□□□□ -0.03
ABCF1-206ENST00000479542 TMEM105Q8N8V8 129 aa14.87□□□□□ -0.03
ABCF1-206ENST00000479542 CEP170P1Q96L14 293 aa14.87□□□□□ -0.03
ABCF1-206ENST00000479542 SNX27Q96L92 541 aa14.87□□□□□ -0.03
ABCF1-206ENST00000479542 NLRP4Q96MN2 994 aa14.87□□□□□ -0.03
ABCF1-206ENST00000479542 PHF20Q9BVI0 1012 aa14.87□□□□□ -0.03
ABCF1-206ENST00000479542 RXFP1Q9HBX9 757 aa14.87□□□□□ -0.03
ABCF1-206ENST00000479542 CDH22Q9UJ99 828 aa14.87□□□□□ -0.03
ABCF1-206ENST00000479542 DENND4AQ7Z401 1863 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 CFAP54Q96N23 3096 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 ZFHX2Q9C0A1 2572 aaPredicted RBP14.86□□□□□ -0.03
ABCF1-206ENST00000479542 ZMYM2Q9UBW7 1377 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 TMEM150BA6NC51 233 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 MEIS3P2A8K0S8 358 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 H0Y858 1186 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 NRP1O14786 923 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 LYPLA2O95372 231 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 XBP1P17861 261 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 KLRC2P26717 231 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 DSC1Q08554 894 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 LAMTOR4Q0VGL1 99 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 UBXN11Q5T124 520 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 NEK8Q86SG6 692 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 KSR1Q8IVT5 923 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 SLFN12Q8IYM2 578 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 AUTS2Q8WXX7 1259 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 FAM193BQ96PV7 902 aaPredicted RBP14.86□□□□□ -0.03
ABCF1-206ENST00000479542 RPS6KC1Q96S38 1066 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 RTP3Q9BQQ7 232 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 NFKBIZQ9BYH8 718 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 ZSWIM4Q9H7M6 989 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 DUSP12Q9UNI6 340 aa14.86□□□□□ -0.03
ABCF1-206ENST00000479542 PLXNA3P51805 1871 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 SLC37A4O43826 429 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 CDKL5O76039 1030 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 ASGR2P07307 311 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 AOC1P19801 751 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 SP100P23497 879 aaPredicted RBP14.85□□□□□ -0.03
ABCF1-206ENST00000479542 YWHABP31946 246 aaKnown RBP14.85□□□□□ -0.03
ABCF1-206ENST00000479542 NPEPPSP55786 919 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 PTENP60484 403 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 NCBP1Q09161 790 aaKnown RBP14.85□□□□□ -0.03
ABCF1-206ENST00000479542 INF2Q27J81 1249 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 LETM2Q2VYF4 491 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 TMC5Q6UXY8 1006 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 FERMT3Q86UX7 667 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 COLGALT2Q8IYK4 626 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 STAMQ92783 540 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 HAS1Q92839 578 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 SH2D3AQ9BRG2 576 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 HERC2P3Q9BVR0 1158 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 PLEKHA4Q9H4M7 779 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 MINDY3Q9H8M7 445 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 KCNK12Q9HB15 430 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 WDR6Q9NNW5 1121 aaKnown RBP14.85□□□□□ -0.03
ABCF1-206ENST00000479542 CHST7Q9NS84 486 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 WNT16Q9UBV4 365 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 INPP5FQ9Y2H2 1132 aa14.85□□□□□ -0.03
ABCF1-206ENST00000479542 STK36Q9NRP7 1315 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms