RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 PCDHGB7Q9Y5F8 929 aa6.99□□□□□ -1.29
SF3B1-209ENST00000479532 KIAA1217Q5T5P2 1943 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 VPS37CA5D8V6 355 aaPredicted RBP6.98□□□□□ -1.29
SF3B1-209ENST00000479532 KIAA1324LA8MWY0 1029 aaPredicted RBP6.98□□□□□ -1.29
SF3B1-209ENST00000479532 MSCO60682 206 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 EIF3JO75822 258 aaKnown RBP6.98□□□□□ -1.29
SF3B1-209ENST00000479532 RGS9O75916 674 aaPredicted RBP6.98□□□□□ -1.29
SF3B1-209ENST00000479532 CNGA1P29973 690 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 CYP2C19P33261 490 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 FAM193AP78312 1265 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 GUCY1B3Q02153 619 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 PGM5Q15124 567 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 CCL14Q16627 93 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 PCNX4Q63HM2 1172 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 KCNV1Q6PIU1 500 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 IGF2-ASQ6U949 168 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 DTHD1Q6ZMT9 781 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 DIS3L2Q8IYB7 885 aaKnown RBP6.98□□□□□ -1.29
SF3B1-209ENST00000479532 TRIB2Q92519 343 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 CDHR1Q96JP9 859 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 FOXP1Q9H334 677 aaPredicted RBP6.98□□□□□ -1.29
SF3B1-209ENST00000479532 COL20A1Q9P218 1284 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 TCEAL9Q9UHQ7 104 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 ZHX1Q9UKY1 873 aaPredicted RBP6.98□□□□□ -1.29
SF3B1-209ENST00000479532 FAM184BQ9ULE4 1060 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.98□□□□□ -1.29
SF3B1-209ENST00000479532 MCM3APO60318 1980 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 LRRC37A2A6NM11 1700 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 CEP350Q5VT06 3117 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 FRMPD4Q14CM0 1322 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 RPTORQ8N122 1335 aa6.98□□□□□ -1.29
SF3B1-209ENST00000479532 MYH7BA7E2Y1 1941 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 METTL12A8MUP2 240 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 NKRFO15226 690 aaKnown RBP eCLIP6.97□□□□□ -1.29
SF3B1-209ENST00000479532 MAFGO15525 162 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 MARCH6O60337 910 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 DTNBO60941 627 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 GHRHP01286 108 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 AKR1A1P14550 325 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 GCFC2P16383 781 aaKnown RBP6.97□□□□□ -1.29
SF3B1-209ENST00000479532 CAPN2P17655 700 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 EDNRBP24530 442 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 SREBF1P36956 1147 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 GRIA4P48058 902 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 USP11P51784 963 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 ATP11AP98196 1134 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 SETQ01105 290 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-209ENST00000479532 CAP1Q01518 475 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 CACNB2Q08289 660 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-209ENST00000479532 ACVR2BQ13705 512 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 TTLL4Q14679 1199 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 IQSEC1Q6DN90 963 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 PSAPL1Q6NUJ1 521 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 PIK3AP1Q6ZUJ8 805 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 NEK8Q86SG6 692 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 DTWD1Q8N5C7 304 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 GIMAP8Q8ND71 665 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-209ENST00000479532 RASGRP4Q8TDF6 673 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 MORC4Q8TE76 937 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 TBCKQ8TEA7 893 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 SH3TC2Q8TF17 1288 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 SCFD2Q8WU76 684 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 PGBD1Q96JS3 809 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 MCOLN1Q9GZU1 580 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 RASSF4Q9H2L5 321 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 ACBD3Q9H3P7 528 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 SPC25Q9HBM1 224 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 TMEM260Q9NX78 707 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 FLRT1Q9NZU1 646 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 DDX41Q9UJV9 622 aaKnown RBP6.97□□□□□ -1.29
SF3B1-209ENST00000479532 SLC6A14Q9UN76 642 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 MRVI1Q9Y6F6 885 aa6.97□□□□□ -1.29
SF3B1-209ENST00000479532 BTBD18B2RXH4 712 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 PDE2AO00408 941 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-209ENST00000479532 GSC2O15499 205 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 SEPT4O43236 478 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 FIBPO43427 364 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 STX6O43752 255 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 FBXO24O75426 580 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 BAG4O95429 457 aaKnown RBP6.96□□□□□ -1.3
SF3B1-209ENST00000479532 SNAI1O95863 264 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-209ENST00000479532 TGFB1P01137 390 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 CYP3A4P08684 503 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 TGFB3P10600 412 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 RARBP10826 455 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 XRCC6P12956 609 aaKnown RBP eCLIP6.96□□□□□ -1.3
SF3B1-209ENST00000479532 CYBAP13498 195 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 SYT1P21579 422 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 GRIK1P39086 918 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 TRAPPC10P48553 1259 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 RACK1P63244 317 aaKnown RBP6.96□□□□□ -1.3
SF3B1-209ENST00000479532 TNFAIP2Q03169 654 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 MTMR1Q13613 665 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 PCSK7Q16549 785 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 INF2Q27J81 1249 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 SPRED3Q2MJR0 410 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 LETM2Q2VYF4 491 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 BRDTQ58F21 947 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-209ENST00000479532 MOXD1Q6UVY6 613 aa6.96□□□□□ -1.3
SF3B1-209ENST00000479532 SEPT14Q6ZU15 432 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms