RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 DHX32Q7L7V1 743 aaKnown RBP18.07■□□□□ 0.48
DDX56-210ENST00000479440 MIER3Q7Z3K6 550 aa18.07■□□□□ 0.48
DDX56-210ENST00000479440 SLC44A3Q8N4M1 653 aa18.07■□□□□ 0.48
DDX56-210ENST00000479440 GPR152Q8TDT2 470 aa18.07■□□□□ 0.48
DDX56-210ENST00000479440 SMG7Q92540 1137 aaKnown RBP18.07■□□□□ 0.48
DDX56-210ENST00000479440 CCDC136Q96JN2 1154 aa18.07■□□□□ 0.48
DDX56-210ENST00000479440 TCEANC2Q96MN5 208 aa18.07■□□□□ 0.48
DDX56-210ENST00000479440 RPS6KC1Q96S38 1066 aa18.07■□□□□ 0.48
DDX56-210ENST00000479440 FAM217BQ9NTX9 383 aaPredicted RBP18.07■□□□□ 0.48
DDX56-210ENST00000479440 SIT1Q9Y3P8 196 aa18.07■□□□□ 0.48
DDX56-210ENST00000479440 PCDHB2Q9Y5E7 798 aa18.07■□□□□ 0.48
DDX56-210ENST00000479440 NRP1O14786 923 aa18.06■□□□□ 0.48
DDX56-210ENST00000479440 DDHD2O94830 711 aa18.06■□□□□ 0.48
DDX56-210ENST00000479440 SP9P0CG40 484 aa18.06■□□□□ 0.48
DDX56-210ENST00000479440 GLUD2P49448 558 aa18.06■□□□□ 0.48
DDX56-210ENST00000479440 AGMOQ6ZNB7 445 aa18.06■□□□□ 0.48
DDX56-210ENST00000479440 C1orf210Q8IVY1 113 aa18.06■□□□□ 0.48
DDX56-210ENST00000479440 HDAC7Q8WUI4 952 aa18.06■□□□□ 0.48
DDX56-210ENST00000479440 SLC5A5Q92911 643 aa18.06■□□□□ 0.48
DDX56-210ENST00000479440 MYADMQ96S97 322 aa18.06■□□□□ 0.48
DDX56-210ENST00000479440 PIDD1Q9HB75 910 aa18.06■□□□□ 0.48
DDX56-210ENST00000479440 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.06■□□□□ 0.48
DDX56-210ENST00000479440 TEX28O15482 410 aa18.05■□□□□ 0.48
DDX56-210ENST00000479440 KINO60870 393 aaKnown RBP18.05■□□□□ 0.48
DDX56-210ENST00000479440 EXOSC10Q01780 885 aaKnown RBP18.05■□□□□ 0.48
DDX56-210ENST00000479440 GET4Q7L5D6 327 aaPredicted RBP18.05■□□□□ 0.48
DDX56-210ENST00000479440 PJA1Q8NG27 643 aa18.05■□□□□ 0.48
DDX56-210ENST00000479440 CEP89Q96ST8 783 aa18.05■□□□□ 0.48
DDX56-210ENST00000479440 UBN1Q9NPG3 1134 aa18.05■□□□□ 0.48
DDX56-210ENST00000479440 DLL3Q9NYJ7 618 aa18.05■□□□□ 0.48
DDX56-210ENST00000479440 DLGAP2Q9P1A6 1054 aa18.05■□□□□ 0.48
DDX56-210ENST00000479440 PRG3Q9Y2Y8 225 aaPredicted RBP18.05■□□□□ 0.48
DDX56-210ENST00000479440 WDR81Q562E7 1941 aa18.04■□□□□ 0.48
DDX56-210ENST00000479440 ADAMTS3O15072 1205 aa18.04■□□□□ 0.48
DDX56-210ENST00000479440 MAFO75444 373 aaPredicted RBP18.04■□□□□ 0.48
DDX56-210ENST00000479440 ADD1P35611 737 aaKnown RBP18.04■□□□□ 0.48
DDX56-210ENST00000479440 OR1G1P47890 313 aa18.04■□□□□ 0.48
DDX56-210ENST00000479440 USP11P51784 963 aa18.04■□□□□ 0.48
DDX56-210ENST00000479440 FGD1P98174 961 aa18.04■□□□□ 0.48
DDX56-210ENST00000479440 AKAP17AQ02040 695 aaKnown RBP18.04■□□□□ 0.48
DDX56-210ENST00000479440 KRT32Q14532 448 aa18.04■□□□□ 0.48
DDX56-210ENST00000479440 DCLRE1AQ6PJP8 1040 aa18.04■□□□□ 0.48
DDX56-210ENST00000479440 MRPL10Q7Z7H8 261 aaKnown RBP18.04■□□□□ 0.48
DDX56-210ENST00000479440 CNNM3Q8NE01 707 aa18.04■□□□□ 0.48
DDX56-210ENST00000479440 BORCS6Q96GS4 357 aa18.04■□□□□ 0.48
DDX56-210ENST00000479440 PLEKHA4Q9H4M7 779 aa18.04■□□□□ 0.48
DDX56-210ENST00000479440 SLC2A4RGQ9NR83 387 aa18.04■□□□□ 0.48
DDX56-210ENST00000479440 MARCH5Q9NX47 278 aa18.04■□□□□ 0.48
DDX56-210ENST00000479440 ZDHHC7Q9NXF8 308 aa18.04■□□□□ 0.48
DDX56-210ENST00000479440 TMEM150BA6NC51 233 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 NR1I2O75469 434 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 RFPL2O75678 378 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 PSMD10O75832 226 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 PAPLNO95428 1278 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 C1RP00736 705 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 POMCP01189 267 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 SDHBP21912 280 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 SLC7A3Q8WY07 619 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 PHKBQ93100 1093 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 SHDQ96IW2 340 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 SH2D3AQ9BRG2 576 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 C22orf23Q9BZE7 217 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 RXFP1Q9HBX9 757 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 COL4A3BPQ9Y5P4 624 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 NID2Q14112 1375 aa18.03■□□□□ 0.48
DDX56-210ENST00000479440 ANHXE9PGG2 379 aa18.02■□□□□ 0.48
DDX56-210ENST00000479440 SPTLC1O15269 473 aa18.02■□□□□ 0.48
DDX56-210ENST00000479440 PRPF3O43395 683 aaKnown RBP18.02■□□□□ 0.48
DDX56-210ENST00000479440 HMGB1P09429 215 aaKnown RBP18.02■□□□□ 0.48
DDX56-210ENST00000479440 LAMP2P13473 410 aa18.02■□□□□ 0.48
DDX56-210ENST00000479440 NCLP19338 710 aaKnown RBP18.02■□□□□ 0.48
DDX56-210ENST00000479440 AFF1P51825 1210 aaKnown RBP18.02■□□□□ 0.48
DDX56-210ENST00000479440 DSG1Q02413 1049 aa18.02■□□□□ 0.48
DDX56-210ENST00000479440 CREMQ03060 361 aa18.02■□□□□ 0.48
DDX56-210ENST00000479440 HTR4Q13639 388 aa18.02■□□□□ 0.48
DDX56-210ENST00000479440 SRGAP1Q7Z6B7 1085 aa18.02■□□□□ 0.48
DDX56-210ENST00000479440 KSR1Q8IVT5 923 aa18.02■□□□□ 0.48
DDX56-210ENST00000479440 EXOC8Q8IYI6 725 aa18.02■□□□□ 0.48
DDX56-210ENST00000479440 RNF168Q8IYW5 571 aaPredicted RBP18.02■□□□□ 0.48
DDX56-210ENST00000479440 ZNF707Q96C28 371 aaPredicted RBP18.02■□□□□ 0.48
DDX56-210ENST00000479440 IFT122Q9HBG6 1241 aa18.02■□□□□ 0.48
DDX56-210ENST00000479440 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.02■□□□□ 0.48
DDX56-210ENST00000479440 ZFP37Q9Y6Q3 630 aaPredicted RBP18.02■□□□□ 0.48
DDX56-210ENST00000479440 NUMBLQ9Y6R0 609 aa18.02■□□□□ 0.48
DDX56-210ENST00000479440 DDX11L8A8MPP1 907 aa18.01■□□□□ 0.47
DDX56-210ENST00000479440 STBD1O95210 358 aa18.01■□□□□ 0.47
DDX56-210ENST00000479440 ITGA4P13612 1032 aa18.01■□□□□ 0.47
DDX56-210ENST00000479440 RSPO4Q2I0M5 234 aaPredicted RBP18.01■□□□□ 0.47
DDX56-210ENST00000479440 Q4G0T1 1027 aa18.01■□□□□ 0.47
DDX56-210ENST00000479440 COLGALT2Q8IYK4 626 aa18.01■□□□□ 0.47
DDX56-210ENST00000479440 PSPC1Q8WXF1 523 aaKnown RBP18.01■□□□□ 0.47
DDX56-210ENST00000479440 PRKD2Q9BZL6 878 aa18.01■□□□□ 0.47
DDX56-210ENST00000479440 NT5C3AQ9H0P0 336 aa18.01■□□□□ 0.47
DDX56-210ENST00000479440 NCDNQ9UBB6 729 aa18.01■□□□□ 0.47
DDX56-210ENST00000479440 PPME1Q9Y570 386 aa18.01■□□□□ 0.47
DDX56-210ENST00000479440 DNAH14Q0VDD8 3507 aa18■□□□□ 0.47
DDX56-210ENST00000479440 DKC1O60832 514 aaKnown RBP eCLIP18■□□□□ 0.47
DDX56-210ENST00000479440 ERLIN2O94905 339 aa18■□□□□ 0.47
DDX56-210ENST00000479440 MYBP10242 640 aa18■□□□□ 0.47
DDX56-210ENST00000479440 MLH1P40692 756 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms