RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 CEP170P1Q96L14 293 aa11.52□□□□□ -0.57
CDK11A-216ENST00000479362 MTG1Q9BT17 334 aaPredicted RBP11.52□□□□□ -0.57
CDK11A-216ENST00000479362 TMEM121BQ9BXQ6 578 aaPredicted RBP11.52□□□□□ -0.57
CDK11A-216ENST00000479362 LRRC27Q9C0I9 530 aa11.52□□□□□ -0.57
CDK11A-216ENST00000479362 IRF2BPLQ9H1B7 796 aa11.52□□□□□ -0.57
CDK11A-216ENST00000479362 CYP26B1Q9NR63 512 aa11.52□□□□□ -0.57
CDK11A-216ENST00000479362 TLR9Q9NR96 1032 aa11.52□□□□□ -0.57
CDK11A-216ENST00000479362 COL1A2P08123 1366 aa11.52□□□□□ -0.57
CDK11A-216ENST00000479362 EVPLQ92817 2033 aa11.52□□□□□ -0.57
CDK11A-216ENST00000479362 NLRC5Q86WI3 1866 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 HAS3O00219 553 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 USO1O60763 962 aaKnown RBP11.51□□□□□ -0.57
CDK11A-216ENST00000479362 KRT18P05783 430 aaKnown RBP11.51□□□□□ -0.57
CDK11A-216ENST00000479362 MYL1P05976 194 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 CYP11B2P19099 503 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 LTBRP36941 435 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 KCNJ6P48051 423 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 NPEPPSP55786 919 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 ASIC1P78348 528 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 PNOCQ13519 176 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 KIAA0753Q2KHM9 967 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 TCEAL5Q5H9L2 206 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 PADI6Q6TGC4 694 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 POP1Q99575 1024 aaKnown RBP11.51□□□□□ -0.57
CDK11A-216ENST00000479362 MTRQ99707 1265 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 SH2D3AQ9BRG2 576 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 C17orf80Q9BSJ5 609 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 RUSC1Q9BVN2 902 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 NIFKQ9BYG3 293 aaKnown RBP11.51□□□□□ -0.57
CDK11A-216ENST00000479362 TRIM9Q9C026 710 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 RNPEPQ9H4A4 650 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 KCND2Q9NZV8 630 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 PPME1Q9Y570 386 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 ATRXP46100 2492 aa11.51□□□□□ -0.57
CDK11A-216ENST00000479362 MYMKA6NI61 221 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 DGAT1O75907 488 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 GJB5O95377 273 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 SMIM10L2AP0DMW4 78 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 SMIM10L2BP0DMW5 78 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 CASP1P29466 404 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 RFC5P40937 340 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 POLGP54098 1239 aaPredicted RBP11.5□□□□□ -0.57
CDK11A-216ENST00000479362 ZXDAP98168 799 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 TBC1D8BQ0IIM8 1120 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 DPYDQ12882 1025 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 PPFIA1Q13136 1202 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 CUL4BQ13620 913 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 TIGD5Q53EQ6 642 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 ZNF484Q5JVG2 852 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 RINT1Q6NUQ1 792 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 DYMQ7RTS9 669 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 DDX12PQ92771 950 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 CNTNAP3BQ96NU0 1288 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 RAD9AQ99638 391 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 C7orf25Q9BPX7 421 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 ZBED2Q9BTP6 218 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 CNTNAP3Q9BZ76 1288 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 BLZF1Q9H2G9 400 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 ATP6V0A4Q9HBG4 840 aa11.5□□□□□ -0.57
CDK11A-216ENST00000479362 EP300Q09472 2414 aaPredicted RBP11.5□□□□□ -0.57
CDK11A-216ENST00000479362 MAP1BP46821 2468 aaKnown RBP11.5□□□□□ -0.57
CDK11A-216ENST00000479362 MICAL3Q7RTP6 2002 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 NPHP3-ACAD11A0A0J9YXS1 232 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 ZBTB42B2RXF5 422 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 RBAK-RBAKDNI3L0D1 243 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 TBCAO75347 108 aaKnown RBP11.49□□□□□ -0.57
CDK11A-216ENST00000479362 SMC2O95347 1197 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 INSRRP14616 1297 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 AVPR2P30518 371 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 NBL1P41271 181 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 IGBP1P78318 339 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 RAD51AP2Q09MP3 1159 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 GPNMBQ14956 572 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 EMC2Q15006 297 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 TARBP2Q15633 366 aaKnown RBP11.49□□□□□ -0.57
CDK11A-216ENST00000479362 GRIK4Q16099 956 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 ARSHQ5FYA8 562 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 CNNM4Q6P4Q7 775 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 RBM43Q6ZSC3 357 aaKnown RBP11.49□□□□□ -0.57
CDK11A-216ENST00000479362 EP400NLQ6ZTU2 488 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 C1orf186Q6ZWK4 172 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 MCPH1Q8NEM0 835 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 TRAPPC12Q8WVT3 735 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 SLC7A3Q8WY07 619 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 ERCC4Q92889 916 aaPredicted RBP11.49□□□□□ -0.57
CDK11A-216ENST00000479362 SMARCE1Q969G3 411 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 CEP89Q96ST8 783 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 REEP2Q9BRK0 252 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 TIPINQ9BVW5 301 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 CLDND1Q9NY35 253 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 USP24Q9UPU5 2620 aa11.49□□□□□ -0.57
CDK11A-216ENST00000479362 CEP250Q9BV73 2442 aa11.48□□□□□ -0.57
CDK11A-216ENST00000479362 RRN3P2A6NIE6 340 aa11.48□□□□□ -0.57
CDK11A-216ENST00000479362 MBTPS2O43462 519 aa11.48□□□□□ -0.57
CDK11A-216ENST00000479362 HIP1RO75146 1068 aa11.48□□□□□ -0.57
CDK11A-216ENST00000479362 C22orf31O95567 290 aa11.48□□□□□ -0.57
CDK11A-216ENST00000479362 RPN1P04843 607 aaKnown RBP11.48□□□□□ -0.57
CDK11A-216ENST00000479362 IDEP14735 1019 aa11.48□□□□□ -0.57
CDK11A-216ENST00000479362 GUCY2CP25092 1073 aa11.48□□□□□ -0.57
CDK11A-216ENST00000479362 DLX2Q07687 328 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms