RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ATF7P17544 494 aaPredicted RBP17.08■□□□□ 0.32
C9orf3-217ENST00000479161 ARF4P18085 180 aaPredicted RBP17.08■□□□□ 0.32
C9orf3-217ENST00000479161 NPTX2P47972 431 aa17.08■□□□□ 0.32
C9orf3-217ENST00000479161 KRT85P78386 507 aa17.08■□□□□ 0.32
C9orf3-217ENST00000479161 DNM1Q05193 864 aaKnown RBP17.08■□□□□ 0.32
C9orf3-217ENST00000479161 RRAGBQ5VZM2 374 aa17.08■□□□□ 0.32
C9orf3-217ENST00000479161 RASSF8Q8NHQ8 419 aa17.08■□□□□ 0.32
C9orf3-217ENST00000479161 DEPTORQ8TB45 409 aa17.08■□□□□ 0.32
C9orf3-217ENST00000479161 P2RX5Q93086 422 aa17.08■□□□□ 0.32
C9orf3-217ENST00000479161 GAS2L1Q99501 681 aaPredicted RBP17.08■□□□□ 0.32
C9orf3-217ENST00000479161 PYM1Q9BRP8 204 aaKnown RBP17.08■□□□□ 0.32
C9orf3-217ENST00000479161 PRRC2BQ5JSZ5 2229 aaKnown RBP17.07■□□□□ 0.32
C9orf3-217ENST00000479161 INPPL1O15357 1258 aa17.07■□□□□ 0.32
C9orf3-217ENST00000479161 NCLP19338 710 aaKnown RBP17.07■□□□□ 0.32
C9orf3-217ENST00000479161 BMPR1AP36894 532 aa17.07■□□□□ 0.32
C9orf3-217ENST00000479161 SMTNP53814 917 aa17.07■□□□□ 0.32
C9orf3-217ENST00000479161 CSPP1Q1MSJ5 1256 aa17.07■□□□□ 0.32
C9orf3-217ENST00000479161 UBXN11Q5T124 520 aa17.07■□□□□ 0.32
C9orf3-217ENST00000479161 TMEM192Q8IY95 271 aa17.07■□□□□ 0.32
C9orf3-217ENST00000479161 SLC17A8Q8NDX2 589 aa17.07■□□□□ 0.32
C9orf3-217ENST00000479161 LRRC15Q8TF66 581 aa17.07■□□□□ 0.32
C9orf3-217ENST00000479161 FAM161BQ96MY7 647 aa17.07■□□□□ 0.32
C9orf3-217ENST00000479161 PLIN2Q99541 437 aa17.07■□□□□ 0.32
C9orf3-217ENST00000479161 SCAND2PQ9GZW5 306 aaPredicted RBP17.07■□□□□ 0.32
C9orf3-217ENST00000479161 RNF19AQ9NV58 838 aa17.07■□□□□ 0.32
C9orf3-217ENST00000479161 PCDHB2Q9Y5E7 798 aa17.07■□□□□ 0.32
C9orf3-217ENST00000479161 H3BNC9 293 aa17.06■□□□□ 0.32
C9orf3-217ENST00000479161 K7ERI5 159 aa17.06■□□□□ 0.32
C9orf3-217ENST00000479161 SSBP05455 408 aaKnown RBP eCLIP17.06■□□□□ 0.32
C9orf3-217ENST00000479161 PEX3P56589 373 aa17.06■□□□□ 0.32
C9orf3-217ENST00000479161 EPC2Q52LR7 807 aa17.06■□□□□ 0.32
C9orf3-217ENST00000479161 SPECC1Q5M775 1068 aa17.06■□□□□ 0.32
C9orf3-217ENST00000479161 FOXD4L5Q5VV16 416 aaPredicted RBP17.06■□□□□ 0.32
C9orf3-217ENST00000479161 SLC27A1Q6PCB7 646 aa17.06■□□□□ 0.32
C9orf3-217ENST00000479161 SV2BQ7L1I2 683 aa17.06■□□□□ 0.32
C9orf3-217ENST00000479161 GPBP1Q86WP2 473 aa17.06■□□□□ 0.32
C9orf3-217ENST00000479161 HACE1Q8IYU2 909 aa17.06■□□□□ 0.32
C9orf3-217ENST00000479161 FOXD4L4Q8WXT5 416 aaPredicted RBP17.06■□□□□ 0.32
C9orf3-217ENST00000479161 CASD1Q96PB1 797 aa17.06■□□□□ 0.32
C9orf3-217ENST00000479161 MRPL9Q9BYD2 267 aaKnown RBP17.06■□□□□ 0.32
C9orf3-217ENST00000479161 LRRC27Q9C0I9 530 aa17.06■□□□□ 0.32
C9orf3-217ENST00000479161 PRDM12Q9H4Q4 367 aa17.06■□□□□ 0.32
C9orf3-217ENST00000479161 AAASQ9NRG9 546 aa17.06■□□□□ 0.32
C9orf3-217ENST00000479161 PCDHA7Q9UN72 937 aa17.06■□□□□ 0.32
C9orf3-217ENST00000479161 KIAA1671Q9BY89 1806 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 EYSQ5T1H1 3165 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 N4BP3O15049 544 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 LPXNO60711 386 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 PRKCBP05771 671 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 MAPTP10636 758 aaKnown RBP17.05■□□□□ 0.32
C9orf3-217ENST00000479161 PRPF4BQ13523 1007 aaKnown RBP17.05■□□□□ 0.32
C9orf3-217ENST00000479161 GIT2Q14161 759 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 MCM6Q14566 821 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 ADALQ6DHV7 355 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 CNNM4Q6P4Q7 775 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 SHC4Q6S5L8 630 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 APBB1IPQ7Z5R6 666 aaPredicted RBP17.05■□□□□ 0.32
C9orf3-217ENST00000479161 ABI1Q8IZP0 508 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 LRRC43Q8N309 656 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 FBXO22Q8NEZ5 403 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 ARNTL2Q8WYA1 636 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 REEP2Q9BRK0 252 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 C11orf84Q9BUA3 381 aaPredicted RBP17.05■□□□□ 0.32
C9orf3-217ENST00000479161 LMAN2LQ9H0V9 348 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 ST6GALNAC4Q9H4F1 302 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 MAGEF1Q9HAY2 307 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 PARVGQ9HBI0 331 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 KMT5AQ9NQR1 393 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 KANSL3Q9P2N6 904 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 SEL1LQ9UBV2 794 aa17.05■□□□□ 0.32
C9orf3-217ENST00000479161 CIZ1Q9ULV3 898 aaPredicted RBP17.05■□□□□ 0.32
C9orf3-217ENST00000479161 CCDC169A6NNP5 214 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 TBKBP1A7MCY6 615 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 FOSL2P15408 326 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 STAT6P42226 847 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 ME1P48163 572 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 NCKAP1LP55160 1127 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 E2F4Q16254 413 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 CLLU1OSQ5K130 101 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 RESP18Q5W5W9 173 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 GLB1LQ6UWU2 654 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 IQUBQ8NA54 791 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 TMEM161BQ8NDZ6 487 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 LEO1Q8WVC0 666 aaPredicted RBP17.04■□□□□ 0.32
C9orf3-217ENST00000479161 MYLIPQ8WY64 445 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 C17orf80Q9BSJ5 609 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 TNMDQ9H2S6 317 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 TNFSF13BQ9Y275 285 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 GIT1Q9Y2X7 761 aa17.04■□□□□ 0.32
C9orf3-217ENST00000479161 MRPL42Q9Y6G3 142 aaKnown RBP17.04■□□□□ 0.32
C9orf3-217ENST00000479161 FAM237AA0A1B0GTK4 181 aa17.03■□□□□ 0.32
C9orf3-217ENST00000479161 RBAK-RBAKDNI3L0D1 243 aa17.03■□□□□ 0.32
C9orf3-217ENST00000479161 GTPBP6O43824 516 aaPredicted RBP17.03■□□□□ 0.32
C9orf3-217ENST00000479161 OFD1O75665 1012 aa17.03■□□□□ 0.32
C9orf3-217ENST00000479161 FGFR1P11362 822 aa17.03■□□□□ 0.32
C9orf3-217ENST00000479161 LAG3P18627 525 aa17.03■□□□□ 0.32
C9orf3-217ENST00000479161 CMA1P23946 247 aa17.03■□□□□ 0.32
C9orf3-217ENST00000479161 UBE3AQ05086 875 aa17.03■□□□□ 0.32
C9orf3-217ENST00000479161 ADGRE1Q14246 886 aa17.03■□□□□ 0.32
C9orf3-217ENST00000479161 ZPBP2Q6X784 338 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms