RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 ADHFE1Q8IWW8 467 aa22.68■■□□□ 1.22
TRIM8-203ENST00000479004 NRDE2Q9H7Z3 1164 aa22.68■■□□□ 1.22
TRIM8-203ENST00000479004 ENTPD7Q9NQZ7 604 aa22.68■■□□□ 1.22
TRIM8-203ENST00000479004 TBC1D13Q9NVG8 400 aa22.68■■□□□ 1.22
TRIM8-203ENST00000479004 BARX2Q9UMQ3 279 aaPredicted RBP22.68■■□□□ 1.22
TRIM8-203ENST00000479004 NT5C1B-RDH14C9J2C7 533 aa22.67■■□□□ 1.22
TRIM8-203ENST00000479004 TSPAN1O60635 241 aa22.67■■□□□ 1.22
TRIM8-203ENST00000479004 ERLIN2O94905 339 aa22.67■■□□□ 1.22
TRIM8-203ENST00000479004 GLRA2P23416 452 aa22.67■■□□□ 1.22
TRIM8-203ENST00000479004 U2AF2P26368 475 aaKnown RBP eCLIP22.67■■□□□ 1.22
TRIM8-203ENST00000479004 AXLP30530 894 aa22.67■■□□□ 1.22
TRIM8-203ENST00000479004 TMC7Q7Z402 723 aa22.67■■□□□ 1.22
TRIM8-203ENST00000479004 C4orf32Q8N8J7 132 aa22.67■■□□□ 1.22
TRIM8-203ENST00000479004 VN1R2Q8NFZ6 395 aa22.67■■□□□ 1.22
TRIM8-203ENST00000479004 NACC1Q96RE7 527 aa22.67■■□□□ 1.22
TRIM8-203ENST00000479004 NFKBIZQ9BYH8 718 aa22.67■■□□□ 1.22
TRIM8-203ENST00000479004 DBR1Q9UK59 544 aaKnown RBP22.67■■□□□ 1.22
TRIM8-203ENST00000479004 NOL7Q9UMY1 257 aaKnown RBP22.67■■□□□ 1.22
TRIM8-203ENST00000479004 INPP5FQ9Y2H2 1132 aa22.67■■□□□ 1.22
TRIM8-203ENST00000479004 CNTNAP2Q9UHC6 1331 aa22.66■■□□□ 1.22
TRIM8-203ENST00000479004 CARNS1A5YM72 827 aa22.66■■□□□ 1.22
TRIM8-203ENST00000479004 HIDE1A8MVS5 230 aa22.66■■□□□ 1.22
TRIM8-203ENST00000479004 ZC3H11AO75152 810 aaKnown RBP eCLIP22.66■■□□□ 1.22
TRIM8-203ENST00000479004 NCLP19338 710 aaKnown RBP22.66■■□□□ 1.22
TRIM8-203ENST00000479004 RPA1P27694 616 aa22.66■■□□□ 1.22
TRIM8-203ENST00000479004 RBM10P98175 930 aaKnown RBP22.66■■□□□ 1.22
TRIM8-203ENST00000479004 MBTD1Q05BQ5 628 aa22.66■■□□□ 1.22
TRIM8-203ENST00000479004 KCNC3Q14003 757 aa22.66■■□□□ 1.22
TRIM8-203ENST00000479004 TMEM184AQ6ZMB5 413 aa22.66■■□□□ 1.22
TRIM8-203ENST00000479004 SMRP1Q8NCR6 262 aa22.66■■□□□ 1.22
TRIM8-203ENST00000479004 CNNM3Q8NE01 707 aa22.66■■□□□ 1.22
TRIM8-203ENST00000479004 ERMNQ8TAM6 284 aa22.66■■□□□ 1.22
TRIM8-203ENST00000479004 POLR3FQ9H1D9 316 aaPredicted RBP22.66■■□□□ 1.22
TRIM8-203ENST00000479004 KIF3AQ9Y496 699 aa22.66■■□□□ 1.22
TRIM8-203ENST00000479004 INO80B-WBP1J3KQ70 363 aa22.65■■□□□ 1.22
TRIM8-203ENST00000479004 USO1O60763 962 aaKnown RBP22.65■■□□□ 1.22
TRIM8-203ENST00000479004 GALTP07902 379 aa22.65■■□□□ 1.22
TRIM8-203ENST00000479004 COL9A1P20849 921 aa22.65■■□□□ 1.22
TRIM8-203ENST00000479004 NBR1Q14596 966 aa22.65■■□□□ 1.22
TRIM8-203ENST00000479004 AMHR2Q16671 573 aa22.65■■□□□ 1.22
TRIM8-203ENST00000479004 TMEM173Q86WV6 379 aaPredicted RBP22.65■■□□□ 1.22
TRIM8-203ENST00000479004 MRPL43Q8N983 215 aaKnown RBP22.65■■□□□ 1.22
TRIM8-203ENST00000479004 SMG8Q8ND04 991 aaKnown RBP22.65■■□□□ 1.22
TRIM8-203ENST00000479004 URGCPQ8TCY9 931 aa22.65■■□□□ 1.22
TRIM8-203ENST00000479004 CCDC51Q96ER9 411 aa22.65■■□□□ 1.22
TRIM8-203ENST00000479004 TMEM169Q96HH4 297 aa22.65■■□□□ 1.22
TRIM8-203ENST00000479004 RSAD1Q9HA92 442 aa22.65■■□□□ 1.22
TRIM8-203ENST00000479004 TOB1P50616 345 aaPredicted RBP22.64■■□□□ 1.21
TRIM8-203ENST00000479004 FXR2P51116 673 aaKnown RBP eCLIP22.64■■□□□ 1.21
TRIM8-203ENST00000479004 AFF1P51825 1210 aaKnown RBP22.64■■□□□ 1.21
TRIM8-203ENST00000479004 RNASELQ05823 741 aaKnown RBP22.64■■□□□ 1.21
TRIM8-203ENST00000479004 NCBP1Q09161 790 aaKnown RBP22.64■■□□□ 1.21
TRIM8-203ENST00000479004 SMC1AQ14683 1233 aaKnown RBP22.64■■□□□ 1.21
TRIM8-203ENST00000479004 NOTUMQ6P988 496 aa22.64■■□□□ 1.21
TRIM8-203ENST00000479004 POTEGQ6S5H5 508 aa22.64■■□□□ 1.21
TRIM8-203ENST00000479004 MAEAQ7L5Y9 396 aa22.64■■□□□ 1.21
TRIM8-203ENST00000479004 ZNF280BQ86YH2 543 aa22.64■■□□□ 1.21
TRIM8-203ENST00000479004 INTS4Q96HW7 963 aaKnown RBP22.64■■□□□ 1.21
TRIM8-203ENST00000479004 IGSF21Q96ID5 467 aa22.64■■□□□ 1.21
TRIM8-203ENST00000479004 CPB2Q96IY4 423 aa22.64■■□□□ 1.21
TRIM8-203ENST00000479004 POP1Q99575 1024 aaKnown RBP22.64■■□□□ 1.21
TRIM8-203ENST00000479004 EIF2AQ9BY44 585 aaKnown RBP22.64■■□□□ 1.21
TRIM8-203ENST00000479004 GPRC5CQ9NQ84 441 aa22.64■■□□□ 1.21
TRIM8-203ENST00000479004 DNAJB4Q9UDY4 337 aa22.64■■□□□ 1.21
TRIM8-203ENST00000479004 SMC3Q9UQE7 1217 aa22.64■■□□□ 1.21
TRIM8-203ENST00000479004 C2orf71A6NGG8 1288 aa22.63■■□□□ 1.21
TRIM8-203ENST00000479004 MUTP22033 750 aa22.63■■□□□ 1.21
TRIM8-203ENST00000479004 BECN1Q14457 450 aa22.63■■□□□ 1.21
TRIM8-203ENST00000479004 MCPH1Q8NEM0 835 aa22.63■■□□□ 1.21
TRIM8-203ENST00000479004 CSRNP2Q9H175 543 aa22.63■■□□□ 1.21
TRIM8-203ENST00000479004 UBN1Q9NPG3 1134 aa22.63■■□□□ 1.21
TRIM8-203ENST00000479004 KANSL3Q9P2N6 904 aa22.63■■□□□ 1.21
TRIM8-203ENST00000479004 IPPQ9Y573 584 aa22.63■■□□□ 1.21
TRIM8-203ENST00000479004 B4GALT3O60512 393 aa22.62■■□□□ 1.21
TRIM8-203ENST00000479004 DDHD2O94830 711 aa22.62■■□□□ 1.21
TRIM8-203ENST00000479004 SRGAP2BP0DMP2 458 aa22.62■■□□□ 1.21
TRIM8-203ENST00000479004 ITGA4P13612 1032 aa22.62■■□□□ 1.21
TRIM8-203ENST00000479004 ARF4P18085 180 aaPredicted RBP22.62■■□□□ 1.21
TRIM8-203ENST00000479004 SLC11A1P49279 550 aa22.62■■□□□ 1.21
TRIM8-203ENST00000479004 HAUS3Q68CZ6 603 aa22.62■■□□□ 1.21
TRIM8-203ENST00000479004 DDX53Q86TM3 631 aaKnown RBP22.62■■□□□ 1.21
TRIM8-203ENST00000479004 BCL7CQ8WUZ0 217 aaPredicted RBP22.62■■□□□ 1.21
TRIM8-203ENST00000479004 LRFN3Q9BTN0 628 aa22.62■■□□□ 1.21
TRIM8-203ENST00000479004 GBP3Q9H0R5 595 aa22.62■■□□□ 1.21
TRIM8-203ENST00000479004 ZBP1Q9H171 429 aa22.62■■□□□ 1.21
TRIM8-203ENST00000479004 C11orf16Q9NQ32 467 aa22.62■■□□□ 1.21
TRIM8-203ENST00000479004 USP15Q9Y4E8 981 aaPredicted RBP22.62■■□□□ 1.21
TRIM8-203ENST00000479004 PCDHB6Q9Y5E3 794 aa22.62■■□□□ 1.21
TRIM8-203ENST00000479004 GPR37L1O60883 481 aa22.61■■□□□ 1.21
TRIM8-203ENST00000479004 CXCL14O95715 111 aa22.61■■□□□ 1.21
TRIM8-203ENST00000479004 ALADP13716 330 aa22.61■■□□□ 1.21
TRIM8-203ENST00000479004 PTGDRQ13258 359 aa22.61■■□□□ 1.21
TRIM8-203ENST00000479004 PDIA5Q14554 519 aa22.61■■□□□ 1.21
TRIM8-203ENST00000479004 BMS1Q14692 1282 aaKnown RBP22.61■■□□□ 1.21
TRIM8-203ENST00000479004 ECM1Q16610 540 aa22.61■■□□□ 1.21
TRIM8-203ENST00000479004 TMEM31Q5JXX7 168 aa22.61■■□□□ 1.21
TRIM8-203ENST00000479004 ANKRD54Q6NXT1 300 aa22.61■■□□□ 1.21
TRIM8-203ENST00000479004 PADI6Q6TGC4 694 aa22.61■■□□□ 1.21
TRIM8-203ENST00000479004 VPS52Q8N1B4 723 aa22.61■■□□□ 1.21
TRIM8-203ENST00000479004 TMEM175Q9BSA9 504 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms