RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SPATA31A1Q5TZJ5 1347 aa6.81□□□□□ -1.32
CCDC171-207ENST00000478913 A0A1B0GTL3 188 aa6.81□□□□□ -1.32
CCDC171-207ENST00000478913 ZNF28P17035 718 aa6.81□□□□□ -1.32
CCDC171-207ENST00000478913 IL13P35225 146 aa6.81□□□□□ -1.32
CCDC171-207ENST00000478913 SARSP49591 514 aaKnown RBP6.81□□□□□ -1.32
CCDC171-207ENST00000478913 ANAPC15P60006 121 aa6.81□□□□□ -1.32
CCDC171-207ENST00000478913 WDR72Q3MJ13 1102 aa6.81□□□□□ -1.32
CCDC171-207ENST00000478913 SLFN12LQ6IEE8 588 aa6.81□□□□□ -1.32
CCDC171-207ENST00000478913 TIGD7Q6NT04 549 aaPredicted RBP6.81□□□□□ -1.32
CCDC171-207ENST00000478913 PRPF38AQ8NAV1 312 aaKnown RBP6.81□□□□□ -1.32
CCDC171-207ENST00000478913 CLRN3Q8NCR9 226 aa6.81□□□□□ -1.32
CCDC171-207ENST00000478913 ZCCHC14Q8WYQ9 949 aaKnown RBP6.81□□□□□ -1.32
CCDC171-207ENST00000478913 OR10A5Q9H207 317 aa6.81□□□□□ -1.32
CCDC171-207ENST00000478913 MS4A5Q9H3V2 200 aa6.81□□□□□ -1.32
CCDC171-207ENST00000478913 MSRAQ9UJ68 235 aa6.81□□□□□ -1.32
CCDC171-207ENST00000478913 NOC2LQ9Y3T9 749 aaKnown RBP6.81□□□□□ -1.32
CCDC171-207ENST00000478913 PTPRUQ92729 1446 aa6.81□□□□□ -1.32
CCDC171-207ENST00000478913 THSD7AQ9UPZ6 1657 aa6.81□□□□□ -1.32
CCDC171-207ENST00000478913 SPATA31A3Q5VYP0 1347 aa6.8□□□□□ -1.32
CCDC171-207ENST00000478913 H0Y858 1186 aa6.8□□□□□ -1.32
CCDC171-207ENST00000478913 DDX3XO00571 662 aaKnown RBP eCLIP6.8□□□□□ -1.32
CCDC171-207ENST00000478913 KDM1AO60341 852 aa6.8□□□□□ -1.32
CCDC171-207ENST00000478913 APOL3O95236 402 aa6.8□□□□□ -1.32
CCDC171-207ENST00000478913 KNG1P01042 644 aa6.8□□□□□ -1.32
CCDC171-207ENST00000478913 APEX1P27695 318 aaKnown RBP6.8□□□□□ -1.32
CCDC171-207ENST00000478913 RGS3P49796 1198 aa6.8□□□□□ -1.32
CCDC171-207ENST00000478913 IGBP1P78318 339 aa6.8□□□□□ -1.32
CCDC171-207ENST00000478913 CARFQ8N187 725 aa6.8□□□□□ -1.32
CCDC171-207ENST00000478913 ZSCAN18Q8TBC5 510 aaPredicted RBP6.8□□□□□ -1.32
CCDC171-207ENST00000478913 ZDHHC5Q9C0B5 715 aa6.8□□□□□ -1.32
CCDC171-207ENST00000478913 POFUT1Q9H488 388 aa6.8□□□□□ -1.32
CCDC171-207ENST00000478913 FTSJ1Q9UET6 329 aa6.8□□□□□ -1.32
CCDC171-207ENST00000478913 ADAMTS20P59510 1910 aa6.8□□□□□ -1.32
CCDC171-207ENST00000478913 PXDNLA1KZ92 1463 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 WDR33Q9C0J8 1336 aaKnown RBP6.79□□□□□ -1.32
CCDC171-207ENST00000478913 LCHNA4D1U4 455 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 PRPF6O94906 941 aaKnown RBP6.79□□□□□ -1.32
CCDC171-207ENST00000478913 COL6A1P12109 1028 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 VEGFAP15692 232 aaPredicted RBP6.79□□□□□ -1.32
CCDC171-207ENST00000478913 CFPP27918 469 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 FAPQ12884 760 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 STILQ15468 1287 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 KANK2Q63ZY3 851 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 FRMD7Q6ZUT3 714 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 ESPNLQ6ZVH7 1005 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 CXXC5Q7LFL8 322 aaKnown RBP6.79□□□□□ -1.32
CCDC171-207ENST00000478913 NECAB2Q7Z6G3 386 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 RASSF3Q86WH2 238 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 COG1Q8WTW3 980 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 MYL10Q9BUA6 226 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 SLC5A4Q9NY91 659 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 ADGRL2O95490 1459 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 PXDNQ92626 1479 aa6.79□□□□□ -1.32
CCDC171-207ENST00000478913 PLCH1Q4KWH8 1693 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 C10orf71Q711Q0 1435 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 TRPM2O94759 1503 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 ALG1L2C9J202 215 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 CYP1A1P04798 512 aaPredicted RBP6.78□□□□□ -1.32
CCDC171-207ENST00000478913 GUCY2FP51841 1108 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 EVA1CP58658 441 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 CD83Q01151 205 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 ADCY2Q08462 1091 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 MAP3K12Q12852 859 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 GRM1Q13255 1194 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 FAM50AQ14320 339 aaKnown RBP6.78□□□□□ -1.32
CCDC171-207ENST00000478913 MYBPC3Q14896 1274 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 DEFB115Q30KQ5 88 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 MCTP2Q6DN12 878 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 OTOP2Q7RTS6 562 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 ADAMTS17Q8TE56 1095 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 RPGRQ92834 1020 aaKnown RBP6.78□□□□□ -1.32
CCDC171-207ENST00000478913 FERMT2Q96AC1 680 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 ZNF496Q96IT1 587 aaPredicted RBP6.78□□□□□ -1.32
CCDC171-207ENST00000478913 SPATA25Q9BR10 227 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 FBXO10Q9UK96 956 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 PIK3C2BO00750 1634 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 CDC42BPBQ9Y5S2 1711 aa6.78□□□□□ -1.32
CCDC171-207ENST00000478913 CTTNBP2Q8WZ74 1663 aa6.77□□□□□ -1.32
CCDC171-207ENST00000478913 LAMC1P11047 1609 aa6.77□□□□□ -1.33
CCDC171-207ENST00000478913 PRKD3O94806 890 aa6.77□□□□□ -1.33
CCDC171-207ENST00000478913 ADCY8P40145 1251 aa6.77□□□□□ -1.33
CCDC171-207ENST00000478913 KRT28Q7Z3Y7 464 aa6.77□□□□□ -1.33
CCDC171-207ENST00000478913 TP53I13Q8NBR0 393 aaPredicted RBP6.77□□□□□ -1.33
CCDC171-207ENST00000478913 TMEM168Q9H0V1 697 aa6.77□□□□□ -1.33
CCDC171-207ENST00000478913 SEMA4AQ9H3S1 761 aa6.77□□□□□ -1.33
CCDC171-207ENST00000478913 TOPORSQ9NS56 1045 aaPredicted RBP6.77□□□□□ -1.33
CCDC171-207ENST00000478913 KCNG1Q9UIX4 513 aa6.77□□□□□ -1.33
CCDC171-207ENST00000478913 PTPN23Q9H3S7 1636 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 CFAP65Q6ZU64 1925 aaKnown RBP6.76□□□□□ -1.33
CCDC171-207ENST00000478913 ST20-MTHFSA0A0A6YYL1 179 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 KLHL18O94889 574 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 SLURP1P55000 103 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 BCAR1P56945 870 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 NFATC3Q12968 1075 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 MOGSQ13724 837 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 NOLC1Q14978 699 aaKnown RBP eCLIP6.76□□□□□ -1.33
CCDC171-207ENST00000478913 FAM26FQ5R3K3 315 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 GRAMD4Q6IC98 578 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 KIAA1841Q6NSI8 718 aa6.76□□□□□ -1.33
CCDC171-207ENST00000478913 CXorf67Q86X51 503 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms