RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 RNF149Q8NC42 400 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 BCL7CQ8WUZ0 217 aaPredicted RBP14.8□□□□□ -0.04
VCL-205ENST00000478896 TCP11Q8WWU5 503 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 MTRQ99707 1265 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 EMILIN2Q9BXX0 1053 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 DHX33Q9H6R0 707 aaKnown RBP14.8□□□□□ -0.04
VCL-205ENST00000478896 SFXN1Q9H9B4 322 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 WRAP73Q9P2S5 460 aaPredicted RBP14.8□□□□□ -0.04
VCL-205ENST00000478896 STK39Q9UEW8 545 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 STK36Q9NRP7 1315 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 CNTNAP2Q9UHC6 1331 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 DENND4AQ7Z401 1863 aa14.8□□□□□ -0.04
VCL-205ENST00000478896 TBX3O15119 743 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 BAG4O95429 457 aaKnown RBP14.79□□□□□ -0.04
VCL-205ENST00000478896 PDGFBP01127 241 aaPredicted RBP14.79□□□□□ -0.04
VCL-205ENST00000478896 KLRC2P26717 231 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 CYP4A11Q02928 519 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 LAMTOR4Q0VGL1 99 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 EPHA7Q15375 998 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 PTPN14Q15678 1187 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 XKR9Q5GH70 373 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 AGMOQ6ZNB7 445 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 ZNF280BQ86YH2 543 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 C4orf19Q8IY42 314 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
VCL-205ENST00000478896 PRPF31Q8WWY3 499 aaKnown RBP14.79□□□□□ -0.04
VCL-205ENST00000478896 IRF2BPLQ9H1B7 796 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 BRMS1Q9HCU9 246 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 MYO10Q9HD67 2058 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 FAM86C1Q9NVL1 165 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 KANSL3Q9P2N6 904 aa14.79□□□□□ -0.04
VCL-205ENST00000478896 TDRD15B5MCY1 1934 aaKnown RBP14.78□□□□□ -0.04
VCL-205ENST00000478896 DDHD2O94830 711 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 BRD1O95696 1058 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 POMCP01189 267 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 ASGR2P07307 311 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 CTTNQ14247 550 aaKnown RBP14.78□□□□□ -0.04
VCL-205ENST00000478896 KANK3Q6NY19 840 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 TMC5Q6UXY8 1006 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 CCDC149Q6ZUS6 474 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 FERMT3Q86UX7 667 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 SLFN12Q8IYM2 578 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 PLCD3Q8N3E9 789 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 OXER1Q8TDS5 423 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 WASF1Q92558 559 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 HAS1Q92839 578 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 ATOH1Q92858 354 aaPredicted RBP14.78□□□□□ -0.04
VCL-205ENST00000478896 DYDC2Q96IM9 177 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 CCDC43Q96MW1 224 aaKnown RBP14.78□□□□□ -0.04
VCL-205ENST00000478896 TMEM175Q9BSA9 504 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 MFSD1Q9H3U5 465 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 ZSWIM4Q9H7M6 989 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 MINDY3Q9H8M7 445 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 MRPL17Q9NRX2 175 aaKnown RBP14.78□□□□□ -0.04
VCL-205ENST00000478896 GJB4Q9NTQ9 266 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 RGL1Q9NZL6 768 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 FAN1Q9Y2M0 1017 aa14.78□□□□□ -0.04
VCL-205ENST00000478896 C2orf16Q68DN1 1984 aa14.77□□□□□ -0.04
VCL-205ENST00000478896 C2CD2LO14523 706 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 ASAP2O43150 1006 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 B4GALT3O60512 393 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 DTNBO60941 627 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 ALDH2P05091 517 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 URODP06132 367 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 ITGA4P13612 1032 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 KRT2P35908 639 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 TPH2Q8IWU9 490 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 ZDHHC14Q8IZN3 488 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 CNNM3Q8NE01 707 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 SLC22A17Q8WUG5 538 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 ACSF2Q96CM8 615 aaPredicted RBP14.77□□□□□ -0.05
VCL-205ENST00000478896 KLHL5Q96PQ7 755 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 VN1R3Q9BXE9 311 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 SMOC2Q9H3U7 446 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 ORC3Q9UBD5 711 aaPredicted RBP14.77□□□□□ -0.05
VCL-205ENST00000478896 LIMD1Q9UGP4 676 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 USTQ9Y2C2 406 aa14.77□□□□□ -0.05
VCL-205ENST00000478896 PRG3Q9Y2Y8 225 aaPredicted RBP14.77□□□□□ -0.05
VCL-205ENST00000478896 INO80B-WBP1J3KQ70 363 aa14.76□□□□□ -0.05
VCL-205ENST00000478896 NRP1O14786 923 aa14.76□□□□□ -0.05
VCL-205ENST00000478896 PFKFB2O60825 505 aa14.76□□□□□ -0.05
VCL-205ENST00000478896 NCLP19338 710 aaKnown RBP14.76□□□□□ -0.05
VCL-205ENST00000478896 HOXA11P31270 313 aaPredicted RBP14.76□□□□□ -0.05
VCL-205ENST00000478896 OR1G1P47890 313 aa14.76□□□□□ -0.05
VCL-205ENST00000478896 CLCN4P51793 760 aa14.76□□□□□ -0.05
VCL-205ENST00000478896 AFF1P51825 1210 aaKnown RBP14.76□□□□□ -0.05
VCL-205ENST00000478896 AK2P54819 239 aa14.76□□□□□ -0.05
VCL-205ENST00000478896 NCBP1Q09161 790 aaKnown RBP14.76□□□□□ -0.05
VCL-205ENST00000478896 TFDP1Q14186 410 aa14.76□□□□□ -0.05
VCL-205ENST00000478896 MXD4Q14582 209 aaPredicted RBP14.76□□□□□ -0.05
VCL-205ENST00000478896 UBXN11Q5T124 520 aa14.76□□□□□ -0.05
VCL-205ENST00000478896 NOTUMQ6P988 496 aa14.76□□□□□ -0.05
VCL-205ENST00000478896 MRPL10Q7Z7H8 261 aaKnown RBP14.76□□□□□ -0.05
VCL-205ENST00000478896 APOL6Q9BWW8 343 aa14.76□□□□□ -0.05
VCL-205ENST00000478896 TRIM6Q9C030 488 aaPredicted RBP14.76□□□□□ -0.05
VCL-205ENST00000478896 UBN1Q9NPG3 1134 aa14.76□□□□□ -0.05
VCL-205ENST00000478896 TPCN1Q9ULQ1 816 aa14.76□□□□□ -0.05
VCL-205ENST00000478896 IPPQ9Y573 584 aa14.76□□□□□ -0.05
VCL-205ENST00000478896 FAM205CA6NFA0 338 aa14.75□□□□□ -0.05
VCL-205ENST00000478896 H0Y858 1186 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms