RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 TMEM117Q9H0C3 514 aa11.03□□□□□ -0.64
SCAMP3-206ENST00000478737 C17orf75Q9HAS0 396 aa11.03□□□□□ -0.64
SCAMP3-206ENST00000478737 KCND2Q9NZV8 630 aa11.03□□□□□ -0.64
SCAMP3-206ENST00000478737 MRPL42Q9Y6G3 142 aaKnown RBP11.03□□□□□ -0.64
SCAMP3-206ENST00000478737 GTPBP6O43824 516 aaPredicted RBP11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 TSPAN1O60635 241 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 CUTAO60888 179 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 FGFR1P11362 822 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 IGFBP4P22692 258 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 GUCY2CP25092 1073 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 NAMPTP43490 491 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 GATMP50440 423 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 SLC12A3P55017 1021 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 PPP2R5AQ15172 486 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 CLLU1OSQ5K130 101 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 LRRC55Q6ZSA7 311 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 MAEAQ7L5Y9 396 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 DAW1Q8N136 415 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 BSNDQ8WZ55 320 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 KCNN1Q92952 543 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 CALML4Q96GE6 196 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 TIPINQ9BVW5 301 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 SCAND2PQ9GZW5 306 aaPredicted RBP11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 GDPD2Q9HCC8 539 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 FAM105AQ9NUU6 356 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 KCNG1Q9UIX4 513 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 MTUS1Q9ULD2 1270 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 PIN4Q9Y237 131 aaKnown RBP11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 PCDHB2Q9Y5E7 798 aa11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 PRRC2BQ5JSZ5 2229 aaKnown RBP11.02□□□□□ -0.65
SCAMP3-206ENST00000478737 A0A0C4DFX4 3053 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 TBKBP1A7MCY6 615 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 INO80B-WBP1J3KQ70 363 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 INPPL1O15357 1258 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 ARF4P18085 180 aaPredicted RBP11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 PLCG1P19174 1290 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 EFNA5P52803 228 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 NCBP1Q09161 790 aaKnown RBP11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 CCDC173Q0VFZ6 552 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 MAPK7Q13164 816 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 GPM6BQ13491 265 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 CAMK1Q14012 370 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 KARSQ15046 597 aaKnown RBP11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 TWF2Q6IBS0 349 aaKnown RBP11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 NOTUMQ6P988 496 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 LRSAM1Q6UWE0 723 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 USP49Q70CQ1 688 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 CNNM3Q8NE01 707 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 LRRC15Q8TF66 581 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 GDPD5Q8WTR4 605 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 MRPL38Q96DV4 380 aaKnown RBP11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 EPSTI1Q96J88 318 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 PLIN2Q99541 437 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 C11orf84Q9BUA3 381 aaPredicted RBP11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 RUSC1Q9BVN2 902 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 CCDC113Q9H0I3 377 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 C2orf40Q9H1Z8 148 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 CWH43Q9H720 699 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 TYW1Q9NV66 732 aaKnown RBP11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 PRMT7Q9NVM4 692 aaPredicted RBP11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 CCDC39Q9UFE4 941 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 RCOR1Q9UKL0 485 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 PCDHA7Q9UN72 937 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 PLAGL2Q9UPG8 496 aa11.01□□□□□ -0.65
SCAMP3-206ENST00000478737 ACKR2O00590 384 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 OFD1O75665 1012 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 ERLIN2O94905 339 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 PLA2G4BP0C869 781 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 PTPROQ16827 1216 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 TPRNQ4KMQ1 711 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 ARSHQ5FYA8 562 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 AXDND1Q5T1B0 1012 aaPredicted RBP11□□□□□ -0.65
SCAMP3-206ENST00000478737 CCDC183Q5T5S1 534 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 SMG8Q8ND04 991 aaKnown RBP11□□□□□ -0.65
SCAMP3-206ENST00000478737 SPPL3Q8TCT6 385 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 SPIRE2Q8WWL2 714 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 PGBD4Q96DM1 585 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 IFT74Q96LB3 600 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 DRC1Q96MC2 740 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 LMAN2LQ9H0V9 348 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 UBN1Q9NPG3 1134 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 BLOC1S4Q9NUP1 217 aa11□□□□□ -0.65
SCAMP3-206ENST00000478737 LRRIQ4A6NIV6 560 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 MEIS3P2A8K0S8 358 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 GRM6O15303 877 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 B4GALT5O43286 388 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 HIP1RO75146 1068 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 SSBP05455 408 aaKnown RBP eCLIP10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 ITGB1P05556 798 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 CTNNB1P35222 781 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 STAT6P42226 847 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 NPTX2P47972 431 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 PLCB3Q01970 1234 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 UBE3AQ05086 875 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 COL19A1Q14993 1142 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 MAPK6Q16659 721 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 PAN2Q504Q3 1202 aaKnown RBP10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 SHC4Q6S5L8 630 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 AGMOQ6ZNB7 445 aa10.99□□□□□ -0.65
SCAMP3-206ENST00000478737 CCDC73Q6ZRK6 1079 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms