RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 SEL1LQ9UBV2 794 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 MSRAQ9UJ68 235 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 PCDHB7Q9Y5E2 793 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 EVPLQ92817 2033 aa12.53□□□□□ -0.4
SRRT-211ENST00000478693 FAM237AA0A1B0GTK4 181 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 GRXCR1A8MXD5 290 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 N4BP3O15049 544 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 KINO60870 393 aaKnown RBP12.52□□□□□ -0.41
SRRT-211ENST00000478693 PRPF40AO75400 957 aaKnown RBP12.52□□□□□ -0.41
SRRT-211ENST00000478693 GCNT3O95395 438 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 SKIP12755 728 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 ARF4P18085 180 aaPredicted RBP12.52□□□□□ -0.41
SRRT-211ENST00000478693 CASP1P29466 404 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 MATR3P43243 847 aaKnown RBP eCLIP12.52□□□□□ -0.41
SRRT-211ENST00000478693 ZNF131P52739 623 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 NCKAP1LP55160 1127 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 UBE2HP62256 183 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 FAM160A1Q05DH4 1040 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 COASYQ13057 564 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 DSC3Q14574 896 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 LRIT3Q3SXY7 679 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 HABP4Q5JVS0 413 aaKnown RBP12.52□□□□□ -0.41
SRRT-211ENST00000478693 FAM109BQ6ICB4 259 aaPredicted RBP12.52□□□□□ -0.41
SRRT-211ENST00000478693 KRBA2Q6ZNG9 492 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 HAUS6Q7Z4H7 955 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 APBB1IPQ7Z5R6 666 aaPredicted RBP12.52□□□□□ -0.41
SRRT-211ENST00000478693 CDR2LQ86X02 465 aaPredicted RBP12.52□□□□□ -0.41
SRRT-211ENST00000478693 SLC17A8Q8NDX2 589 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 CCDC47Q96A33 483 aaKnown RBP12.52□□□□□ -0.41
SRRT-211ENST00000478693 CCDC51Q96ER9 411 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 PAGE5Q96GU1 130 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 MRPL4Q9BYD3 311 aaKnown RBP12.52□□□□□ -0.41
SRRT-211ENST00000478693 CCDC113Q9H0I3 377 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 TMEM134Q9H6X4 195 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 FAM105AQ9NUU6 356 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 CNTNAP2Q9UHC6 1331 aa12.52□□□□□ -0.41
SRRT-211ENST00000478693 GADD45BO75293 160 aaPredicted RBP12.51□□□□□ -0.41
SRRT-211ENST00000478693 GJB5O95377 273 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 NPTXRO95502 500 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 MAPTP10636 758 aaKnown RBP12.51□□□□□ -0.41
SRRT-211ENST00000478693 HARSP12081 509 aaKnown RBP12.51□□□□□ -0.41
SRRT-211ENST00000478693 NMT1P30419 496 aaKnown RBP12.51□□□□□ -0.41
SRRT-211ENST00000478693 ABCD1P33897 745 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 SMAD3P84022 425 aaKnown RBP12.51□□□□□ -0.41
SRRT-211ENST00000478693 CUL4BQ13620 913 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 AMHR2Q16671 573 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 FAM187BQ17R55 369 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 ATF7IP2Q5U623 682 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 KANK3Q6NY19 840 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 SLC27A1Q6PCB7 646 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 STXBP4Q6ZWJ1 553 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 UNC13DQ70J99 1090 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 RTN4RL1Q86UN2 441 aaPredicted RBP12.51□□□□□ -0.41
SRRT-211ENST00000478693 ECHDC2Q86YB7 292 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 HACE1Q8IYU2 909 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 ABI1Q8IZP0 508 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 TMEM161BQ8NDZ6 487 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 TOP1MTQ969P6 601 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 DNAJC19Q96DA6 116 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 C7orf25Q9BPX7 421 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 APOL6Q9BWW8 343 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 FZD8Q9H461 694 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 EXOC1Q9NV70 894 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 TMEM161AQ9NX61 479 aa12.51□□□□□ -0.41
SRRT-211ENST00000478693 HOOK1Q9UJC3 728 aaKnown RBP12.51□□□□□ -0.41
SRRT-211ENST00000478693 C9IYK1 514 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 ACKR2O00590 384 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 HOXA2O43364 376 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 GTPBP6O43824 516 aaPredicted RBP12.5□□□□□ -0.41
SRRT-211ENST00000478693 MYL1P05976 194 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 SCP2P22307 547 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 DNAJB2P25686 324 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 LIG4P49917 911 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 ZNF568Q3ZCX4 644 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 PAN2Q504Q3 1202 aaKnown RBP12.5□□□□□ -0.41
SRRT-211ENST00000478693 FMR1NBQ8N0W7 255 aaPredicted RBP12.5□□□□□ -0.41
SRRT-211ENST00000478693 PGBD4Q96DM1 585 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 TCHPQ9BT92 498 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 EIF2AQ9BY44 585 aaKnown RBP12.5□□□□□ -0.41
SRRT-211ENST00000478693 PBX4Q9BYU1 374 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 NKX2-4Q9H2Z4 354 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 PDZD7Q9H5P4 517 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 ANKFY1Q9P2R3 1169 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 USP20Q9Y2K6 914 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 PCDHA11Q9Y5I1 949 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 DNAH12Q6ZR08 3092 aa12.5□□□□□ -0.41
SRRT-211ENST00000478693 A0A0U1RQF3 1178 aa12.49□□□□□ -0.41
SRRT-211ENST00000478693 PVALEFA0A1B0GWK0 134 aa12.49□□□□□ -0.41
SRRT-211ENST00000478693 FRMD3A2A2Y4 597 aa12.49□□□□□ -0.41
SRRT-211ENST00000478693 TBKBP1A7MCY6 615 aa12.49□□□□□ -0.41
SRRT-211ENST00000478693 HNRNPDLO14979 420 aaKnown RBP12.49□□□□□ -0.41
SRRT-211ENST00000478693 NR1I2O75469 434 aa12.49□□□□□ -0.41
SRRT-211ENST00000478693 CA3P07451 260 aa12.49□□□□□ -0.41
SRRT-211ENST00000478693 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
SRRT-211ENST00000478693 MYBP10242 640 aa12.49□□□□□ -0.41
SRRT-211ENST00000478693 FGFR1P11362 822 aa12.49□□□□□ -0.41
SRRT-211ENST00000478693 ITGA4P13612 1032 aa12.49□□□□□ -0.41
SRRT-211ENST00000478693 MYOGP15173 224 aa12.49□□□□□ -0.41
SRRT-211ENST00000478693 HOXA11P31270 313 aaPredicted RBP12.49□□□□□ -0.41
SRRT-211ENST00000478693 PBX2P40425 430 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms