RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 C7orf31Q8N865 590 aa5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 LEO1Q8WVC0 666 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 C16orf92Q96LL3 132 aa5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 AGAP2Q99490 1192 aa5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 SYNPO2Q9UMS6 1093 aa5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 ATAD2BQ9ULI0 1458 aa5.55□□□□□ -1.52
CDC42BPA-212ENST00000478573 ALG1L2C9J202 215 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 CBX4O00257 560 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 KPNA6O60684 536 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 PPFIA2O75334 1257 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 PEX11BO96011 259 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 JUNP05412 331 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 PTGS2P35354 604 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 ADCY2Q08462 1091 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 MFSD5Q6N075 450 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 STRA8Q7Z7C7 330 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 NME9Q86XW9 330 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 ZNF512Q96ME7 567 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 UIMC1Q96RL1 719 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 CRAMP1Q96RY5 1269 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 EPC1Q9H2F5 836 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 C14orf93Q9H972 538 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 METTL14Q9HCE5 456 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 TOMM22Q9NS69 142 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 GPRC5BQ9NZH0 403 aa5.54□□□□□ -1.52
CDC42BPA-212ENST00000478573 XDHP47989 1333 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 KLRG2A4D1S0 409 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 GOLGA6L6A8MZA4 724 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 BRINP1O60477 761 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 MFAP3LO75121 409 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 IPO13O94829 963 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 PDGFRBP09619 1106 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 BPIP17213 487 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 GNAT2P19087 354 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 NPEPPSP55786 919 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 EPHA7Q15375 998 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 TIGD7Q6NT04 549 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 ESRP1Q6NXG1 681 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 SLC25A43Q8WUT9 341 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 MNTQ99583 582 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 ELF4Q99607 663 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 PRRX2Q99811 253 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 MYL10Q9BUA6 226 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 POFUT1Q9H488 388 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 MTG2Q9H4K7 406 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 HOMER2Q9NSB8 354 aa5.53□□□□□ -1.52
CDC42BPA-212ENST00000478573 LAMC3Q9Y6N6 1575 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 TMEM191CA6NGB0 347 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 MAFGO15525 162 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 ZEB2O60315 1214 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 STC2O76061 302 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 PRPF6O94906 941 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 F2P00734 622 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 KRT4P19013 534 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 HK1P19367 917 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 TGM1P22735 817 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 KIR2DL3P43628 341 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 RABGGTBP53611 331 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 DSG1Q02413 1049 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 ADCY1Q08828 1119 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 PLEKHG6Q3KR16 790 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 RABL3Q5HYI8 236 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 LAIR1Q6GTX8 287 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 NECAB2Q7Z6G3 386 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 PHYKPLQ8IUZ5 450 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 ULK2Q8IYT8 1036 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 CMTM4Q8IZR5 234 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 SYNE4Q8N205 404 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 ZNF276Q8N554 614 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 OR2W6PQ8NHA6 318 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 RTF1Q92541 710 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 HAS1Q92839 578 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 NOL10Q9BSC4 688 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 B4GALT6Q9UBX8 382 aa5.52□□□□□ -1.53
CDC42BPA-212ENST00000478573 BAZ1BQ9UIG0 1483 aaKnown RBP5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 MROH2BQ7Z745 1585 aa5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 WIZO95785 1651 aa5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 SCNN1BP51168 640 aa5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 EXOSC10Q01780 885 aaKnown RBP5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 STRN3Q13033 797 aa5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 SPIDRQ14159 915 aa5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 FAM214AQ32MH5 1076 aa5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 UNQ6494/PRO21346Q6UXR6 183 aa5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 ATL2Q8NHH9 583 aa5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 ST8SIA2Q92186 375 aa5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 TTC1Q99614 292 aa5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 IFT22Q9H7X7 185 aa5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 H2AFY2Q9P0M6 372 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 ZKSCAN5Q9Y2L8 839 aa5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 PHLDB1Q86UU1 1377 aa5.51□□□□□ -1.53
CDC42BPA-212ENST00000478573 KIF21AQ7Z4S6 1674 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 FOXN1O15353 648 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 GPR39O43194 453 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 OPHN1O60890 802 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 STAT4Q14765 748 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 C1QL3Q5VWW1 255 aa5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 RNF219Q5W0B1 726 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-212ENST00000478573 KIAA1841Q6NSI8 718 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms