RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PRRX2Q99811 253 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 EIF2AK1Q9BQI3 630 aaKnown RBP16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 TMEM175Q9BSA9 504 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 EMILIN2Q9BXX0 1053 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 GBP3Q9H0R5 595 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 TTC12Q9H892 705 aaPredicted RBP16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 RGL1Q9NZL6 768 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 SSX2IPQ9Y2D8 614 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 HCFC2Q9Y5Z7 792 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 IRAK3Q9Y616 596 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 LOXHD1Q8IVV2 1947 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 EVPLQ92817 2033 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 OFD1O75665 1012 aa16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 CXCL14O95715 111 aa16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 CTSAP10619 480 aa16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 ORC2Q13416 577 aaPredicted RBP16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 NECAB1Q8N987 351 aa16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 NSUN7Q8NE18 718 aaKnown RBP16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 ERMNQ8TAM6 284 aa16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 TNFRSF25Q93038 417 aa16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 TRIM6Q9C030 488 aaPredicted RBP16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 ZBP1Q9H171 429 aa16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 ADAM7Q9H2U9 754 aa16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 BMP2KQ9NSY1 1161 aaPredicted RBP16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 GJB4Q9NTQ9 266 aa16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 WRAP73Q9P2S5 460 aaPredicted RBP16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 DPP7Q9UHL4 492 aa16.08■□□□□ 0.16
SMARCE1-209ENST00000478349 NT5C1B-RDH14C9J2C7 533 aa16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 INO80B-WBP1J3KQ70 363 aa16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 GALTP07902 379 aa16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 ITGA4P13612 1032 aa16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 FDPSP14324 419 aaKnown RBP16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 NCLP19338 710 aaKnown RBP16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 LONRF3Q496Y0 759 aa16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 TRIM67Q6ZTA4 783 aa16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 HFE2Q6ZVN8 426 aa16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 BMP8AQ7Z5Y6 402 aa16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 MRPL10Q7Z7H8 261 aaKnown RBP16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 S1PR5Q9H228 398 aa16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 NRDE2Q9H7Z3 1164 aa16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 DAXXQ9UER7 740 aaPredicted RBP16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 PLXNA4Q9HCM2 1894 aa16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 ATG2AQ2TAZ0 1938 aa16.07■□□□□ 0.16
SMARCE1-209ENST00000478349 TMEM221A6NGB7 291 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 BTBD18B2RXH4 712 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 M0R296 226 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 CLASP2O75122 1294 aaKnown RBP16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 SLITRK3O94933 977 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 ALDH2P05091 517 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 XRCC6P12956 609 aaKnown RBP eCLIP16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 TXKP42681 527 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 PTENP60484 403 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 ZXDAP98168 799 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 RBM10P98175 930 aaKnown RBP16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 SIGLEC14Q08ET2 396 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 GNL2Q13823 731 aaKnown RBP16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 PTPN21Q16825 1174 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 SYCE2Q6PIF2 218 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 CABP7Q86V35 215 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 IFNLR1Q8IU57 520 aaPredicted RBP16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 ZNF579Q8NAF0 562 aaKnown RBP16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 MCPH1Q8NEM0 835 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 HSD17B14Q9BPX1 270 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 NFKBIZQ9BYH8 718 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 TSHZ2Q9NRE2 1034 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 FAN1Q9Y2M0 1017 aa16.06■□□□□ 0.16
SMARCE1-209ENST00000478349 ZMYM2Q9UBW7 1377 aa16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 FAM205CA6NFA0 338 aa16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 URODP06132 367 aa16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 SLC11A1P49279 550 aa16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 HMGN5P82970 282 aaKnown RBP16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 EARS2Q5JPH6 523 aaKnown RBP16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 ATAT1Q5SQI0 421 aa16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 AGMOQ6ZNB7 445 aa16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 PBXIP1Q96AQ6 731 aa16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 LLPHQ9BRT6 129 aaKnown RBP16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 APOL5Q9BWW9 433 aa16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 CSRNP2Q9H175 543 aa16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 MINDY3Q9H8M7 445 aa16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 SFXN1Q9H9B4 322 aa16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 TUFT1Q9NNX1 390 aa16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 MRPL17Q9NRX2 175 aaKnown RBP16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 LIMCH1Q9UPQ0 1083 aa16.05■□□□□ 0.16
SMARCE1-209ENST00000478349 TSPAN1O60635 241 aa16.04■□□□□ 0.16
SMARCE1-209ENST00000478349 LARGE1O95461 756 aa16.04■□□□□ 0.16
SMARCE1-209ENST00000478349 HOXA11P31270 313 aaPredicted RBP16.04■□□□□ 0.16
SMARCE1-209ENST00000478349 RARRES1P49788 294 aa16.04■□□□□ 0.16
SMARCE1-209ENST00000478349 MTMR3Q13615 1198 aa16.04■□□□□ 0.16
SMARCE1-209ENST00000478349 HAUS3Q68CZ6 603 aa16.04■□□□□ 0.16
SMARCE1-209ENST00000478349 KIAA1841Q6NSI8 718 aa16.04■□□□□ 0.16
SMARCE1-209ENST00000478349 ZBTB8OSQ8IWT0 167 aa16.04■□□□□ 0.16
SMARCE1-209ENST00000478349 UBALD2Q8IYN6 164 aa16.04■□□□□ 0.16
SMARCE1-209ENST00000478349 PLCD3Q8N3E9 789 aa16.04■□□□□ 0.16
SMARCE1-209ENST00000478349 TDRD5Q8NAT2 981 aaKnown RBP16.04■□□□□ 0.16
SMARCE1-209ENST00000478349 C8orf76Q96K31 380 aa16.04■□□□□ 0.16
SMARCE1-209ENST00000478349 DNAJB4Q9UDY4 337 aa16.04■□□□□ 0.16
SMARCE1-209ENST00000478349 IPPQ9Y573 584 aa16.04■□□□□ 0.16
SMARCE1-209ENST00000478349 MEIS3P2A8K0S8 358 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 INPPL1O15357 1258 aa16.03■□□□□ 0.16
SMARCE1-209ENST00000478349 JAK2O60674 1132 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms