RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 POLR3FQ9H1D9 316 aaPredicted RBP9.22□□□□□ -0.93
ERCC8-205ENST00000477893 IFT122Q9HBG6 1241 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 GPRC5CQ9NQ84 441 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 XPNPEP1Q9NQW7 623 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 RNF19AQ9NV58 838 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 DACT1Q9NYF0 836 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 COG5Q9UP83 839 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 PLAGL2Q9UPG8 496 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 SMC3Q9UQE7 1217 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 KIF3AQ9Y496 699 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 PCDHB6Q9Y5E3 794 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 PCDHB12Q9Y5F1 795 aa9.22□□□□□ -0.93
ERCC8-205ENST00000477893 ARID2Q68CP9 1835 aa9.21□□□□□ -0.93
ERCC8-205ENST00000477893 PP2D1A8MPX8 630 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 INO80B-WBP1J3KQ70 363 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 LINC01565O15544 149 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 HOXA2O43364 376 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 ZC3H11AO75152 810 aaKnown RBP eCLIP9.21□□□□□ -0.94
ERCC8-205ENST00000477893 ERLIN2O94905 339 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 SPATA31C1P0DKV0 1188 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 ATF7P17544 494 aaPredicted RBP9.21□□□□□ -0.94
ERCC8-205ENST00000477893 CCT6AP40227 531 aaKnown RBP9.21□□□□□ -0.94
ERCC8-205ENST00000477893 RARRES1P49788 294 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 TOB1P50616 345 aaPredicted RBP9.21□□□□□ -0.94
ERCC8-205ENST00000477893 FAM189BP81408 668 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 CDC42EP1Q00587 391 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 HYAL1Q12794 435 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 PTGDRQ13258 359 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 CAPSQ13938 189 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 PLPP4Q5VZY2 271 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 LRRC55Q6ZSA7 311 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 ADGRD2Q7Z7M1 963 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 CDR2LQ86X02 465 aaPredicted RBP9.21□□□□□ -0.94
ERCC8-205ENST00000477893 CATSPER3Q86XQ3 398 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 EXOC8Q8IYI6 725 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 SPPL3Q8TCT6 385 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 APOL6Q9BWW8 343 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 INO80BQ9C086 356 aaPredicted RBP9.21□□□□□ -0.94
ERCC8-205ENST00000477893 TMEM117Q9H0C3 514 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 CWH43Q9H720 699 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 POLD4Q9HCU8 107 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 AAASQ9NRG9 546 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 ANKEF1Q9NU02 776 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 LRWD1Q9UFC0 647 aa9.21□□□□□ -0.94
ERCC8-205ENST00000477893 A0A0U1RQF3 1178 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 VPS37CA5D8V6 355 aaPredicted RBP9.2□□□□□ -0.94
ERCC8-205ENST00000477893 ARHGEF35A5YM69 484 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 LRRIQ4A6NIV6 560 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 NT5C1B-RDH14C9J2C7 533 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 TNFRSF10AO00220 468 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 GAS2O43903 313 aaKnown RBP9.2□□□□□ -0.94
ERCC8-205ENST00000477893 DGAT1O75907 488 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 FGF18O76093 207 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 LYPLA2O95372 231 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 BMP1P13497 986 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 IL9P15248 144 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 LAG3P18627 525 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 GLRA2P23416 452 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 U2AF2P26368 475 aaKnown RBP eCLIP9.2□□□□□ -0.94
ERCC8-205ENST00000477893 CDC25AP30304 524 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 NRIP1P48552 1158 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 TRAPPC10P48553 1259 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 RNASELQ05823 741 aaKnown RBP9.2□□□□□ -0.94
ERCC8-205ENST00000477893 CAMK1Q14012 370 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 TFDP1Q14186 410 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 ECM1Q16610 540 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 TMEM132AQ24JP5 1023 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 ZNF598Q86UK7 904 aaKnown RBP9.2□□□□□ -0.94
ERCC8-205ENST00000477893 SNX29Q8TEQ0 813 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 P2RX5Q93086 422 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 ZNF558Q96NG5 402 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 LMAN2LQ9H0V9 348 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 ELAC1Q9H777 363 aaKnown RBP9.2□□□□□ -0.94
ERCC8-205ENST00000477893 TUFT1Q9NNX1 390 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 ENTPD7Q9NQZ7 604 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 CHST12Q9NRB3 414 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 AGPAT5Q9NUQ2 364 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 FAM105AQ9NUU6 356 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 PPME1Q9Y570 386 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 PCDHB2Q9Y5E7 798 aa9.2□□□□□ -0.94
ERCC8-205ENST00000477893 TCF20Q9UGU0 1960 aaKnown RBP9.2□□□□□ -0.94
ERCC8-205ENST00000477893 FNDC1Q4ZHG4 1894 aaPredicted RBP9.19□□□□□ -0.94
ERCC8-205ENST00000477893 ATG2AQ2TAZ0 1938 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 PER2O15055 1255 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 B4GALT5O43286 388 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 TSPAN1O60635 241 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 MCM2P49736 904 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 NDUFV1P49821 464 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 RBM10P98175 930 aaKnown RBP9.19□□□□□ -0.94
ERCC8-205ENST00000477893 MBTD1Q05BQ5 628 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 DLX2Q07687 328 aaPredicted RBP9.19□□□□□ -0.94
ERCC8-205ENST00000477893 ORC2Q13416 577 aaPredicted RBP9.19□□□□□ -0.94
ERCC8-205ENST00000477893 MXD4Q14582 209 aaPredicted RBP9.19□□□□□ -0.94
ERCC8-205ENST00000477893 LARP1BQ659C4 914 aaKnown RBP9.19□□□□□ -0.94
ERCC8-205ENST00000477893 HAUS3Q68CZ6 603 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 PTCRAQ6ISU1 281 aaPredicted RBP9.19□□□□□ -0.94
ERCC8-205ENST00000477893 LLGL2Q6P1M3 1020 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 PADI6Q6TGC4 694 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 KCNT2Q6UVM3 1135 aa9.19□□□□□ -0.94
ERCC8-205ENST00000477893 GLB1LQ6UWU2 654 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms