RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 VN1R3Q9BXE9 311 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 DHX33Q9H6R0 707 aaKnown RBP13.14□□□□□ -0.31
CPSF7-211ENST00000477890 MINDY3Q9H8M7 445 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 RSAD1Q9HA92 442 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 FAM86C1Q9NVL1 165 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 PPME1Q9Y570 386 aa13.14□□□□□ -0.31
CPSF7-211ENST00000477890 DENND4AQ7Z401 1863 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 DDHD2O94830 711 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 XBP1P17861 261 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 YWHABP31946 246 aaKnown RBP13.13□□□□□ -0.31
CPSF7-211ENST00000477890 RFC5P40937 340 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 AFF1P51825 1210 aaKnown RBP13.13□□□□□ -0.31
CPSF7-211ENST00000477890 LAMTOR4Q0VGL1 99 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 SCRN1Q12765 414 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 PTPN14Q15678 1187 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 NCAPH2Q6IBW4 605 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 PPP4R3AQ6IN85 833 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 TMC5Q6UXY8 1006 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 PIK3AP1Q6ZUJ8 805 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 MRPL10Q7Z7H8 261 aaKnown RBP13.13□□□□□ -0.31
CPSF7-211ENST00000477890 PPFIBP1Q86W92 1011 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 POTEDQ86YR6 584 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 C4orf19Q8IY42 314 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 FEZF2Q8TBJ5 459 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 LXNQ9BS40 222 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 SMOC2Q9H3U7 446 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 GJB4Q9NTQ9 266 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 LIMD1Q9UGP4 676 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 FAN1Q9Y2M0 1017 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 CNTNAP2Q9UHC6 1331 aa13.13□□□□□ -0.31
CPSF7-211ENST00000477890 TBX3O15119 743 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 DTNBO60941 627 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 POMCP01189 267 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 ALDH2P05091 517 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 KLRC2P26717 231 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 HOXA11P31270 313 aaPredicted RBP13.12□□□□□ -0.31
CPSF7-211ENST00000477890 CTTNQ14247 550 aaKnown RBP13.12□□□□□ -0.31
CPSF7-211ENST00000477890 EMC2Q15006 297 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 EPHA7Q15375 998 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 XKR9Q5GH70 373 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 UBXN11Q5T124 520 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 OTUD6AQ7L8S5 288 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 ZDHHC14Q8IZN3 488 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 RNF149Q8NC42 400 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 OXER1Q8TDS5 423 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 TCP11Q8WWU5 503 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 HAS1Q92839 578 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 ATOH1Q92858 354 aaPredicted RBP13.12□□□□□ -0.31
CPSF7-211ENST00000477890 DYDC2Q96IM9 177 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 KLHL5Q96PQ7 755 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 NAP1L4Q99733 375 aaKnown RBP13.12□□□□□ -0.31
CPSF7-211ENST00000477890 TMEM175Q9BSA9 504 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 EMILIN2Q9BXX0 1053 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 IRF2BPLQ9H1B7 796 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 SFXN1Q9H9B4 322 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 RGL1Q9NZL6 768 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 KANSL3Q9P2N6 904 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 STK39Q9UEW8 545 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 USTQ9Y2C2 406 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 C2orf16Q68DN1 1984 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 STK36Q9NRP7 1315 aa13.12□□□□□ -0.31
CPSF7-211ENST00000477890 H0Y858 1186 aa13.11□□□□□ -0.31
CPSF7-211ENST00000477890 NRP1O14786 923 aa13.11□□□□□ -0.31
CPSF7-211ENST00000477890 ZBTB39O15060 712 aa13.11□□□□□ -0.31
CPSF7-211ENST00000477890 ASAP2O43150 1006 aa13.11□□□□□ -0.31
CPSF7-211ENST00000477890 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
CPSF7-211ENST00000477890 ERLIN2O94905 339 aa13.11□□□□□ -0.31
CPSF7-211ENST00000477890 CNPP09543 421 aaKnown RBP13.11□□□□□ -0.31
CPSF7-211ENST00000477890 CLCN4P51793 760 aa13.11□□□□□ -0.31
CPSF7-211ENST00000477890 CYP4A11Q02928 519 aa13.11□□□□□ -0.31
CPSF7-211ENST00000477890 CCDC149Q6ZUS6 474 aa13.11□□□□□ -0.31
CPSF7-211ENST00000477890 GPR149Q86SP6 731 aa13.11□□□□□ -0.31
CPSF7-211ENST00000477890 FERMT3Q86UX7 667 aa13.11□□□□□ -0.31
CPSF7-211ENST00000477890 MTRQ99707 1265 aa13.11□□□□□ -0.31
CPSF7-211ENST00000477890 ZSWIM4Q9H7M6 989 aa13.11□□□□□ -0.31
CPSF7-211ENST00000477890 MRPL17Q9NRX2 175 aaKnown RBP13.11□□□□□ -0.31
CPSF7-211ENST00000477890 TDRD15B5MCY1 1934 aaKnown RBP13.11□□□□□ -0.31
CPSF7-211ENST00000477890 CACNA1HO95180 2353 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 FAM205CA6NFA0 338 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 C2CD2LO14523 706 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 GALR2O43603 387 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-211ENST00000477890 ST18O60284 1047 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 GFRA3O60609 400 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 BAG4O95429 457 aaKnown RBP13.1□□□□□ -0.31
CPSF7-211ENST00000477890 URODP06132 367 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 ITGA4P13612 1032 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 NCLP19338 710 aaKnown RBP13.1□□□□□ -0.31
CPSF7-211ENST00000477890 NUBP1P53384 320 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 EARS2Q5JPH6 523 aaKnown RBP13.1□□□□□ -0.31
CPSF7-211ENST00000477890 TPH2Q8IWU9 490 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 SLFN12Q8IYM2 578 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 TMEM105Q8N8V8 129 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 SMG8Q8ND04 991 aaKnown RBP13.1□□□□□ -0.31
CPSF7-211ENST00000477890 CNNM3Q8NE01 707 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 ACSF2Q96CM8 615 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-211ENST00000477890 CPB2Q96IY4 423 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 EIF2AQ9BY44 585 aaKnown RBP13.1□□□□□ -0.31
CPSF7-211ENST00000477890 MFSD1Q9H3U5 465 aa13.1□□□□□ -0.31
CPSF7-211ENST00000477890 UBN1Q9NPG3 1134 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms