RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 CKAP2LQ8IYA6 745 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 RSPH1Q8WYR4 309 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 MAP4K1Q92918 833 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 PRKD2Q9BZL6 878 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 ADAMTS10Q9H324 1103 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 NFASCO94856 1347 aa11□□□□□ -0.65
SMARCB1-206ENST00000477836 IGKV6D-21A0A0A0MT36 114 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 SPDYE3A6NKU9 549 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 MEIS3P2A8K0S8 358 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 DDX39AO00148 427 aaKnown RBP10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 B4GALT3O60512 393 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 KCNK5O95279 499 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 SOD2P04179 222 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 CHMLP26374 656 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 LIMK1P53667 647 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 MFAP1P55081 439 aaKnown RBP10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 ADCY1Q08828 1119 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 ITGB3BPQ13352 177 aaPredicted RBP10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 FZD5Q13467 585 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 UBE2SQ16763 222 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 ABHD15Q6UXT9 468 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 ZNF852Q6ZMS4 543 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 MTSS1LQ765P7 747 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 TAS1R1Q7RTX1 841 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 RUFY2Q8WXA3 655 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 SCLT1Q96NL6 688 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 MAP7D2Q96T17 732 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 MXRA8Q9BRK3 442 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 CNNM2Q9H8M5 875 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 PSTPIP2Q9H939 334 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 ZNF302Q9NR11 478 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 ZDHHC7Q9NXF8 308 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 CDH7Q9ULB5 785 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 SSX2IPQ9Y2D8 614 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 FAN1Q9Y2M0 1017 aa10.99□□□□□ -0.65
SMARCB1-206ENST00000477836 IGF2RP11717 2491 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 HRO43593 1189 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 GAS2O43903 313 aaKnown RBP10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 CSDE1O75534 798 aaKnown RBP10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 OFD1O75665 1012 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 DDHD2O94830 711 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 PAPLNO95428 1278 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 CCNE2O96020 404 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 ALDH2P05091 517 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 DARSP14868 501 aaKnown RBP10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 SPINK2P20155 84 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 ATP4AP20648 1035 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 TMOD1P28289 359 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 KIF5BP33176 963 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 FOXC1Q12948 553 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 SRSF5Q13243 272 aaKnown RBP10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 SF3A2Q15428 464 aaKnown RBP10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 PSAPL1Q6NUJ1 521 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 SWSAP1Q6NVH7 229 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 EFCAB12Q6NXP0 572 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 CYB5R4Q7L1T6 521 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 GRASPQ7Z6J2 395 aaPredicted RBP10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 LRRC71Q8N4P6 559 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 C12orf50Q8NA57 414 aaPredicted RBP10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 HDAC7Q8WUI4 952 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 FAM193BQ96PV7 902 aaPredicted RBP10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 KXD1Q9BQD3 176 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 ESYT1Q9BSJ8 1104 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 PHF20Q9BVI0 1012 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 HERC2P3Q9BVR0 1158 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 PLEKHA4Q9H4M7 779 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 AGO4Q9HCK5 861 aaKnown RBP10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 HEBP1Q9NRV9 189 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 RXFP3Q9NSD7 469 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 NDRG2Q9UN36 371 aaKnown RBP10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 PCDHA6Q9UN73 950 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 MRPS17Q9Y2R5 130 aaKnown RBP10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 PCDHA8Q9Y5H6 950 aa10.98□□□□□ -0.65
SMARCB1-206ENST00000477836 FLNBO75369 2602 aaKnown RBP10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 TMEM8BA6NDV4 472 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 NRP1O14786 923 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 TGM5O43548 720 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 REC8O95072 547 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 GLUD2P49448 558 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 GPC3P51654 580 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 NTHL1P78549 312 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 CCDC6Q16204 474 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 IMMTQ16891 758 aaKnown RBP10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 STPG1Q5TH74 334 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 TWF2Q6IBS0 349 aaKnown RBP10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 TICAM2Q86XR7 235 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 GLYCTKQ8IVS8 523 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 URGCPQ8TCY9 931 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 NLRP7Q8WX94 980 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 FGF13Q92913 245 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 RRP36Q96EU6 259 aaKnown RBP10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 TMEM121BQ9BXQ6 578 aaPredicted RBP10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 RXFP1Q9HBX9 757 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 SENP2Q9HC62 589 aa10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 SEC63Q9UGP8 760 aaKnown RBP10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 MTCL1Q9Y4B5 1905 aaKnown RBP10.97□□□□□ -0.65
SMARCB1-206ENST00000477836 CHURC1-FNTBB4DL54 471 aa10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 TAF4O00268 1085 aa10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 MAGEB2O15479 319 aa10.96□□□□□ -0.65
SMARCB1-206ENST00000477836 SKIP12755 728 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms