RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 KAT6AQ92794 2004 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 DENND3A2RUS2 1198 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 INHBEP58166 350 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 CRHR2Q13324 411 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 TTLL4Q14679 1199 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 TMEM143Q96AN5 459 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 FAM167AQ96KS9 214 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 LUC7L2Q9Y383 392 aaKnown RBP13.25□□□□□ -0.29
PRPF39-203ENST00000477626 MYH10P35580 1976 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 F2P00734 622 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 TXNP10599 105 aaKnown RBP13.25□□□□□ -0.29
PRPF39-203ENST00000477626 RPL13P26373 211 aaKnown RBP13.25□□□□□ -0.29
PRPF39-203ENST00000477626 GTF2H1P32780 548 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 ABCD1P33897 745 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 CYP24A1Q07973 514 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 DMP1Q13316 513 aaPredicted RBP13.25□□□□□ -0.29
PRPF39-203ENST00000477626 ACVR2BQ13705 512 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 IQCEQ6IPM2 695 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 CBWD2Q8IUF1 395 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 ANKRD20A12PQ8NF67 263 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 MYRIPQ8NFW9 859 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 SPATA33Q96N06 139 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 TMEM117Q9H0C3 514 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 UPF3AQ9H1J1 476 aaKnown RBP13.25□□□□□ -0.29
PRPF39-203ENST00000477626 Q9Y3F1 56 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 BTNL10A8MVZ5 291 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 TUBB4AP04350 444 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 SMYD5Q6GMV2 418 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 TSHZ1Q6ZSZ6 1077 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 EEPD1Q7L9B9 569 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 MINDY3Q9H8M7 445 aa13.25□□□□□ -0.29
PRPF39-203ENST00000477626 GPC3P51654 580 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 ETF1P62495 437 aaKnown RBP13.24□□□□□ -0.29
PRPF39-203ENST00000477626 MCL1Q07820 350 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 GRM1Q13255 1194 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 MTERF2Q49AM1 385 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 ZBTB41Q5SVQ8 909 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 FAM160B1Q5W0V3 765 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 IQSEC1Q6DN90 963 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 ZNF784Q8NCA9 323 aaPredicted RBP13.24□□□□□ -0.29
PRPF39-203ENST00000477626 SMC1BQ8NDV3 1235 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 HELQQ8TDG4 1101 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 ZBTB10Q96DT7 871 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 PRIMPOLQ96LW4 560 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 LACRTQ9GZZ8 138 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 ABHD16BQ9H3Z7 469 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 CPA4Q9UI42 421 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 F8VZ95 297 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 XRCC5P13010 732 aaKnown RBP13.24□□□□□ -0.29
PRPF39-203ENST00000477626 CCL14Q16627 93 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 MAEAQ7L5Y9 396 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 PPFIBP1Q86W92 1011 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 XXYLT1Q8NBI6 393 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 ADAMTS10Q9H324 1103 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 SMARCAD1Q9H4L7 1026 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 KMT5AQ9NQR1 393 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 CNTN6Q9UQ52 1028 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 EPN1Q9Y6I3 576 aaPredicted RBP13.24□□□□□ -0.29
PRPF39-203ENST00000477626 TANC1Q9C0D5 1861 aa13.24□□□□□ -0.29
PRPF39-203ENST00000477626 VNN1O95497 513 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 C4BPAP04003 597 aaKnown RBP13.23□□□□□ -0.29
PRPF39-203ENST00000477626 LAMTOR4Q0VGL1 99 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 KIF22Q14807 665 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 PSMD6Q15008 389 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 TCEAL1Q15170 157 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 SNRNP35Q16560 246 aaKnown RBP13.23□□□□□ -0.29
PRPF39-203ENST00000477626 CCSAPQ6IQ19 270 aaPredicted RBP13.23□□□□□ -0.29
PRPF39-203ENST00000477626 INTS8Q75QN2 995 aaKnown RBP13.23□□□□□ -0.29
PRPF39-203ENST00000477626 LRRN4CLQ8ND94 238 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 C16orf45Q96MC5 204 aaPredicted RBP13.23□□□□□ -0.29
PRPF39-203ENST00000477626 LSM14BQ9BX40 385 aaKnown RBP13.23□□□□□ -0.29
PRPF39-203ENST00000477626 IRX2Q9BZI1 471 aaPredicted RBP13.23□□□□□ -0.29
PRPF39-203ENST00000477626 FAM207AQ9NSI2 230 aaPredicted RBP13.23□□□□□ -0.29
PRPF39-203ENST00000477626 PATJQ8NI35 1801 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 GH1P01241 217 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 EPB41P11171 864 aaKnown RBP13.23□□□□□ -0.29
PRPF39-203ENST00000477626 IER5Q5VY09 327 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 ZPBP2Q6X784 338 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 CPLX3Q8WVH0 158 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 PRPF31Q8WWY3 499 aaKnown RBP13.23□□□□□ -0.29
PRPF39-203ENST00000477626 ACO2Q99798 780 aaKnown RBP13.23□□□□□ -0.29
PRPF39-203ENST00000477626 TRIM10Q9UDY6 481 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 GPR32O75388 356 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 CYBAP13498 195 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 ZNF157P51786 506 aaPredicted RBP13.23□□□□□ -0.29
PRPF39-203ENST00000477626 GJB7Q6PEY0 223 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 STXBP4Q6ZWJ1 553 aa13.23□□□□□ -0.29
PRPF39-203ENST00000477626 ZNF571Q7Z3V5 609 aaPredicted RBP13.23□□□□□ -0.29
PRPF39-203ENST00000477626 TRMT1Q9NXH9 659 aaKnown RBP13.23□□□□□ -0.29
PRPF39-203ENST00000477626 PPFIA4O75335 1185 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 TRIM49P0CI25 452 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 TRIM49CP0CI26 452 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 VAMP7P51809 220 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 FKBP15Q5T1M5 1219 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 EHBP1Q8NDI1 1231 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 DDX1Q92499 740 aaKnown RBP13.22□□□□□ -0.29
PRPF39-203ENST00000477626 KREMEN1Q96MU8 473 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 TFR2Q9UP52 801 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 EXTL3O43909 919 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 TOMM70O94826 608 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms