RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 MRPL10Q7Z7H8 261 aaKnown RBP17.47■□□□□ 0.39
CLDN11-204ENST00000477531 NOSTRINQ8IVI9 506 aa17.47■□□□□ 0.39
CLDN11-204ENST00000477531 SMRP1Q8NCR6 262 aa17.47■□□□□ 0.39
CLDN11-204ENST00000477531 NACC1Q96RE7 527 aa17.47■□□□□ 0.39
CLDN11-204ENST00000477531 GBP3Q9H0R5 595 aa17.47■□□□□ 0.39
CLDN11-204ENST00000477531 RSAD1Q9HA92 442 aa17.47■□□□□ 0.39
CLDN11-204ENST00000477531 UBN1Q9NPG3 1134 aa17.47■□□□□ 0.39
CLDN11-204ENST00000477531 XPNPEP1Q9NQW7 623 aa17.47■□□□□ 0.39
CLDN11-204ENST00000477531 TBC1D13Q9NVG8 400 aa17.47■□□□□ 0.39
CLDN11-204ENST00000477531 C19orf67A6NJJ6 358 aa17.46■□□□□ 0.39
CLDN11-204ENST00000477531 USO1O60763 962 aaKnown RBP17.46■□□□□ 0.39
CLDN11-204ENST00000477531 GLP2RO95838 553 aa17.46■□□□□ 0.39
CLDN11-204ENST00000477531 HOXA11P31270 313 aaPredicted RBP17.46■□□□□ 0.39
CLDN11-204ENST00000477531 ARL2P36404 184 aa17.46■□□□□ 0.39
CLDN11-204ENST00000477531 HACE1Q8IYU2 909 aa17.46■□□□□ 0.39
CLDN11-204ENST00000477531 MCPH1Q8NEM0 835 aa17.46■□□□□ 0.39
CLDN11-204ENST00000477531 KHSRPQ92945 711 aaKnown RBP eCLIP17.46■□□□□ 0.39
CLDN11-204ENST00000477531 KIF2CQ99661 725 aa17.46■□□□□ 0.39
CLDN11-204ENST00000477531 POLR3CQ9BUI4 534 aaPredicted RBP17.46■□□□□ 0.39
CLDN11-204ENST00000477531 TRIM6Q9C030 488 aaPredicted RBP17.46■□□□□ 0.39
CLDN11-204ENST00000477531 NRDE2Q9H7Z3 1164 aa17.46■□□□□ 0.39
CLDN11-204ENST00000477531 STK39Q9UEW8 545 aa17.46■□□□□ 0.39
CLDN11-204ENST00000477531 MEIS3P2A8K0S8 358 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 HIDE1A8MVS5 230 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 DCXO43602 365 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 GPR37L1O60883 481 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 CXCL14O95715 111 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 ALDH2P05091 517 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 GALTP07902 379 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 ITGA4P13612 1032 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 CAPSQ13938 189 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 GIT2Q14161 759 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 HAUS3Q68CZ6 603 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 AGMOQ6ZNB7 445 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 MAEAQ7L5Y9 396 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 CATSPER3Q86XQ3 398 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 IFNLR1Q8IU57 520 aaPredicted RBP17.45■□□□□ 0.38
CLDN11-204ENST00000477531 VPS52Q8N1B4 723 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 MRPL43Q8N983 215 aaKnown RBP17.45■□□□□ 0.38
CLDN11-204ENST00000477531 ASAP3Q8TDY4 903 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 CASP10Q92851 521 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 LRFN3Q9BTN0 628 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 NFKBIZQ9BYH8 718 aa17.45■□□□□ 0.38
CLDN11-204ENST00000477531 POLR3FQ9H1D9 316 aaPredicted RBP17.45■□□□□ 0.38
CLDN11-204ENST00000477531 DBR1Q9UK59 544 aaKnown RBP17.45■□□□□ 0.38
CLDN11-204ENST00000477531 A0A087WWV3 80 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 ARHGEF35A5YM69 484 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 TSPAN1O60635 241 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 MED24O75448 989 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 SPATA31C1P0DKV0 1188 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 HOXB8P17481 243 aaPredicted RBP17.44■□□□□ 0.38
CLDN11-204ENST00000477531 NCLP19338 710 aaKnown RBP17.44■□□□□ 0.38
CLDN11-204ENST00000477531 GLRA2P23416 452 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 RPA1P27694 616 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 LLGL2Q6P1M3 1020 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 TMEM184AQ6ZMB5 413 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 DDX53Q86TM3 631 aaKnown RBP17.44■□□□□ 0.38
CLDN11-204ENST00000477531 ZBTB8OSQ8IWT0 167 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 IGSF21Q96ID5 467 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 CPB2Q96IY4 423 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 RAB34Q9BZG1 259 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 CSRNP2Q9H175 543 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 USP15Q9Y4E8 981 aaPredicted RBP17.44■□□□□ 0.38
CLDN11-204ENST00000477531 STK24Q9Y6E0 443 aa17.44■□□□□ 0.38
CLDN11-204ENST00000477531 C2orf71A6NGG8 1288 aa17.43■□□□□ 0.38
CLDN11-204ENST00000477531 LRRIQ4A6NIV6 560 aa17.43■□□□□ 0.38
CLDN11-204ENST00000477531 MUTP22033 750 aa17.43■□□□□ 0.38
CLDN11-204ENST00000477531 MBTD1Q05BQ5 628 aa17.43■□□□□ 0.38
CLDN11-204ENST00000477531 TPRNQ4KMQ1 711 aa17.43■□□□□ 0.38
CLDN11-204ENST00000477531 UBXN11Q5T124 520 aa17.43■□□□□ 0.38
CLDN11-204ENST00000477531 ANKRD54Q6NXT1 300 aa17.43■□□□□ 0.38
CLDN11-204ENST00000477531 TMEM175Q9BSA9 504 aa17.43■□□□□ 0.38
CLDN11-204ENST00000477531 FAN1Q9Y2M0 1017 aa17.43■□□□□ 0.38
CLDN11-204ENST00000477531 HCN4Q9Y3Q4 1203 aa17.43■□□□□ 0.38
CLDN11-204ENST00000477531 IPPQ9Y573 584 aa17.43■□□□□ 0.38
CLDN11-204ENST00000477531 ARID2Q68CP9 1835 aa17.42■□□□□ 0.38
CLDN11-204ENST00000477531 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.42■□□□□ 0.38
CLDN11-204ENST00000477531 FAM86C2PA6NEL3 165 aa17.42■□□□□ 0.38
CLDN11-204ENST00000477531 NR1I2O75469 434 aa17.42■□□□□ 0.38
CLDN11-204ENST00000477531 POMCP01189 267 aa17.42■□□□□ 0.38
CLDN11-204ENST00000477531 CTSAP10619 480 aa17.42■□□□□ 0.38
CLDN11-204ENST00000477531 U2AF2P26368 475 aaKnown RBP eCLIP17.42■□□□□ 0.38
CLDN11-204ENST00000477531 CCT6AP40227 531 aaKnown RBP17.42■□□□□ 0.38
CLDN11-204ENST00000477531 SLC11A1P49279 550 aa17.42■□□□□ 0.38
CLDN11-204ENST00000477531 RBM10P98175 930 aaKnown RBP17.42■□□□□ 0.38
CLDN11-204ENST00000477531 TMEM132AQ24JP5 1023 aa17.42■□□□□ 0.38
CLDN11-204ENST00000477531 POTEGQ6S5H5 508 aa17.42■□□□□ 0.38
CLDN11-204ENST00000477531 VN1R2Q8NFZ6 395 aa17.42■□□□□ 0.38
CLDN11-204ENST00000477531 PHF7Q9BWX1 381 aaPredicted RBP17.42■□□□□ 0.38
CLDN11-204ENST00000477531 C2orf40Q9H1Z8 148 aa17.42■□□□□ 0.38
CLDN11-204ENST00000477531 DNAJB4Q9UDY4 337 aa17.42■□□□□ 0.38
CLDN11-204ENST00000477531 LRWD1Q9UFC0 647 aa17.42■□□□□ 0.38
CLDN11-204ENST00000477531 C5orf42Q9H799 3197 aa17.41■□□□□ 0.38
CLDN11-204ENST00000477531 ARF4P18085 180 aaPredicted RBP17.41■□□□□ 0.38
CLDN11-204ENST00000477531 FXR2P51116 673 aaKnown RBP eCLIP17.41■□□□□ 0.38
CLDN11-204ENST00000477531 KCNC3Q14003 757 aa17.41■□□□□ 0.38
CLDN11-204ENST00000477531 MCTP1Q6DN14 999 aa17.41■□□□□ 0.38
CLDN11-204ENST00000477531 CES5AQ6NT32 575 aa17.41■□□□□ 0.38
CLDN11-204ENST00000477531 PADI6Q6TGC4 694 aa17.41■□□□□ 0.38
CLDN11-204ENST00000477531 ZNF280BQ86YH2 543 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms