RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 CUEDC2Q9H467 287 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 GPRC5CQ9NQ84 441 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 BMP2KQ9NSY1 1161 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 BLOC1S4Q9NUP1 217 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 CHMP5Q9NZZ3 219 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 LARSQ9P2J5 1176 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 ARHGAP28Q9P2N2 729 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 LZTS1Q9Y250 596 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 PCDHB2Q9Y5E7 798 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 PCDHB12Q9Y5F1 795 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 MTCH2Q9Y6C9 303 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 CHD7Q9P2D1 2997 aa13.65□□□□□ -0.22
CLCNKA-205ENST00000477360 CDH23Q9H251 3354 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 A0A087WWV3 80 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 CUTAO60888 179 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 CSDE1O75534 798 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 PLS3P13797 630 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 ARF4P18085 180 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 FGFR4P22455 802 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 NPTX2P47972 431 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 ZNF131P52739 623 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 MAPK7Q13164 816 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 UBXN11Q5T124 520 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 PDE12Q6L8Q7 609 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 FAM173BQ6P4H8 233 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 LARP4BQ92615 738 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 RAD54LQ92698 747 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 CASD1Q96PB1 797 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 PYM1Q9BRP8 204 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 RUSC1Q9BVN2 902 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 RNF19AQ9NV58 838 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 GIT1Q9Y2X7 761 aa13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 MRPL42Q9Y6G3 142 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-205ENST00000477360 RALGAPA2Q2PPJ7 1873 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 FSD2A1L4K1 749 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 TBKBP1A7MCY6 615 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 K7ERI5 159 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 N4BP3O15049 544 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 NCK2O43639 380 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 HIP1RO75146 1068 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 PLCG1P19174 1290 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 MARCKSP29966 332 aaPredicted RBP13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 CTNNB1P35222 781 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 PLCB3Q01970 1234 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 GRIN1Q05586 938 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 GPM6BQ13491 265 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 TIGD5Q53EQ6 642 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 RASSF8Q8NHQ8 419 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 BSNDQ8WZ55 320 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 SYMPKQ92797 1274 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 LRRC27Q9C0I9 530 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 RCOR1Q9UKL0 485 aa13.63□□□□□ -0.23
CLCNKA-205ENST00000477360 EPOPA6NHQ4 379 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 PRKCBP05771 671 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 MAPTP10636 758 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 FGFR1P11362 822 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 PRPF4BQ13523 1007 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 KARSQ15046 597 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 ZRSR1Q15695 479 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 DCAF4L1Q3SXM0 396 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 ARSHQ5FYA8 562 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 NOMO2Q5JPE7 1267 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 CLLU1OSQ5K130 101 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 RRAGBQ5VZM2 374 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 MAEAQ7L5Y9 396 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 URGCPQ8TCY9 931 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 EPSTI1Q96J88 318 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 ADPGKQ9BRR6 497 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 TRIM6Q9C030 488 aaPredicted RBP13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 ST6GALNAC4Q9H4F1 302 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 CWH43Q9H720 699 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 RSAD1Q9HA92 442 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 MAGEF1Q9HAY2 307 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 PARVGQ9HBI0 331 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 KMT5AQ9NQR1 393 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 TYW1Q9NV66 732 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 SEL1LQ9UBV2 794 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 PLAGL2Q9UPG8 496 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 MYO9BQ13459 2157 aa13.62□□□□□ -0.23
CLCNKA-205ENST00000477360 OFD1O75665 1012 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 ITGA4P13612 1032 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 IGFBP4P22692 258 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 PEX3P56589 373 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 CEBPZQ03701 1054 aaKnown RBP13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 COL19A1Q14993 1142 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 CNNM4Q6P4Q7 775 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 ZPBP2Q6X784 338 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 AGMOQ6ZNB7 445 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 GPBP1Q86WP2 473 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 SMG8Q8ND04 991 aaKnown RBP13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 PPP2R3CQ969Q6 453 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 ZNF558Q96NG5 402 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 CERS4Q9HA82 394 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 COG5Q9UP83 839 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 TNFSF13BQ9Y275 285 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 IPPQ9Y573 584 aa13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.61□□□□□ -0.23
CLCNKA-205ENST00000477360 CCDC169A6NNP5 214 aa13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 SSBP05455 408 aaKnown RBP eCLIP13.6□□□□□ -0.23
CLCNKA-205ENST00000477360 ALDH7A1P49419 539 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms