RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 LMAN2LQ9H0V9 348 aa14.84□□□□□ -0.03
ACTN4-205ENST00000477174 POLD4Q9HCU8 107 aa14.84□□□□□ -0.03
ACTN4-205ENST00000477174 RBM19Q9Y4C8 960 aaKnown RBP14.84□□□□□ -0.03
ACTN4-205ENST00000477174 PRRC2BQ5JSZ5 2229 aaKnown RBP14.84□□□□□ -0.03
ACTN4-205ENST00000477174 CARNS1A5YM72 827 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 ACKR2O00590 384 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 HIP1RO75146 1068 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 OFD1O75665 1012 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 LAG3P18627 525 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 DMP1Q13316 513 aaPredicted RBP14.83□□□□□ -0.04
ACTN4-205ENST00000477174 SLC27A1Q6PCB7 646 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 DAW1Q8N136 415 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 LRRC43Q8N309 656 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 LINC00301Q8NCQ3 95 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 RASSF8Q8NHQ8 419 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 HELQQ8TDG4 1101 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 CPB2Q96IY4 423 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 EPSTI1Q96J88 318 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 CWH43Q9H720 699 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 KANSL3Q9P2N6 904 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 TFIP11Q9UBB9 837 aaKnown RBP14.83□□□□□ -0.04
ACTN4-205ENST00000477174 CCDC39Q9UFE4 941 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 PHLPP2Q6ZVD8 1323 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 CNTNAP2Q9UHC6 1331 aa14.83□□□□□ -0.04
ACTN4-205ENST00000477174 CCDC169A6NNP5 214 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 K7ERI5 159 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 GRM6O15303 877 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 B4GALT5O43286 388 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 YEATS4O95619 227 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 F13A1P00488 732 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 PLCG1P19174 1290 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 TXLNAP40222 546 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 NPTX2P47972 431 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 SMTNP53814 917 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 PEX3P56589 373 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 UBE3AQ05086 875 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 MAPK7Q13164 816 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 PRPF4BQ13523 1007 aaKnown RBP14.82□□□□□ -0.04
ACTN4-205ENST00000477174 BECN1Q14457 450 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 KARSQ15046 597 aaKnown RBP14.82□□□□□ -0.04
ACTN4-205ENST00000477174 STK38Q15208 465 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 ARSHQ5FYA8 562 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 NOMO2Q5JPE7 1267 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 USP49Q70CQ1 688 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 HACE1Q8IYU2 909 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 MICALL1Q8N3F8 863 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 KLHL23Q8NBE8 558 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 SMG8Q8ND04 991 aaKnown RBP14.82□□□□□ -0.04
ACTN4-205ENST00000477174 SPPL3Q8TCT6 385 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 SPIRE2Q8WWL2 714 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 RAD54LQ92698 747 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 LPPQ93052 612 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 CLIC6Q96NY7 704 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 CCDC113Q9H0I3 377 aa14.82□□□□□ -0.04
ACTN4-205ENST00000477174 ALG13Q9NP73 1137 aaKnown RBP14.82□□□□□ -0.04
ACTN4-205ENST00000477174 SPTLC2O15270 562 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 PPP6R2O75170 966 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 ITGB1P05556 798 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 PRKCBP05771 671 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 ITGA4P13612 1032 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 PLS3P13797 630 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 ALDH7A1P49419 539 aaKnown RBP14.81□□□□□ -0.04
ACTN4-205ENST00000477174 LONRF3Q496Y0 759 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 TIGD5Q53EQ6 642 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 SPECC1Q5M775 1068 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 FOXD4L5Q5VV16 416 aaPredicted RBP14.81□□□□□ -0.04
ACTN4-205ENST00000477174 KCNT2Q6UVM3 1135 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 AGMOQ6ZNB7 445 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.81□□□□□ -0.04
ACTN4-205ENST00000477174 COLGALT1Q8NBJ5 622 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 FOXD4L4Q8WXT5 416 aaPredicted RBP14.81□□□□□ -0.04
ACTN4-205ENST00000477174 SYMPKQ92797 1274 aaKnown RBP14.81□□□□□ -0.04
ACTN4-205ENST00000477174 EIF2AQ9BY44 585 aaKnown RBP14.81□□□□□ -0.04
ACTN4-205ENST00000477174 TRIM6Q9C030 488 aaPredicted RBP14.81□□□□□ -0.04
ACTN4-205ENST00000477174 TMEM134Q9H6X4 195 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 RSAD1Q9HA92 442 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 KMT5AQ9NQR1 393 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 BLOC1S4Q9NUP1 217 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 LARSQ9P2J5 1176 aaKnown RBP14.81□□□□□ -0.04
ACTN4-205ENST00000477174 STK17AQ9UEE5 414 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 CFAP45Q9UL16 551 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 ODF2LQ9ULJ1 636 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 IPPQ9Y573 584 aa14.81□□□□□ -0.04
ACTN4-205ENST00000477174 MEIS3P2A8K0S8 358 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 SFI1A8K8P3 1242 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 N4BP3O15049 544 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 INPPL1O15357 1258 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 FGF18O76093 207 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 SCP2P22307 547 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 PPM1AP35813 382 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 PLCB3Q01970 1234 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 KRT17Q04695 432 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 PKP1Q13835 747 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 CAMK1Q14012 370 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 RRAGBQ5VZM2 374 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 THNSL1Q8IYQ7 743 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 URGCPQ8TCY9 931 aa14.8□□□□□ -0.04
ACTN4-205ENST00000477174 ATXN2LQ8WWM7 1075 aaKnown RBP14.8□□□□□ -0.04
ACTN4-205ENST00000477174 LARP4BQ92615 738 aaKnown RBP14.8□□□□□ -0.04
ACTN4-205ENST00000477174 ZNF558Q96NG5 402 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms